| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2243 |
|---|
| Symbol | |
|---|
| ID | 4115192 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 2253126 |
|---|
| End bp | 2254160 |
|---|
| Gene Length | 1035 bp |
|---|
| Protein Length | 344 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638037028 |
|---|
| Product | catechol 2,3-dioxygenase |
|---|
| Protein accession | YP_644991 |
|---|
| Protein GI | 108805054 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR03211] catechol 2,3 dioxygenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAG GTGAAGTCGG CGCTGATGGA CGAGGAGCCG CGGGCAACCT GAACGAGGCC
AGGCATCTCA TCTCCCGGCT TGCGCACGTG GAGATCTCGA GCCCCAGGCC CGAGGAGTCG
GTGCGGTGGT TCACCGACGT CTTGGGGCTG CAGGAGTCGG GGCGCGAGGG GCAGTCGGTC
TACCTGCGGG CCTGGGGCGA GTTTTTCCAC CACAGCCTGG TGGTAACCGA GGGACCGGAG
CCCGCACTCC TGCACGTGGG TTGGCGCACC TCGGGCCCCG AGGAACTGGA GCGGGCCGTG
GAGAGGATCG AGAGGACGGG GATGGGCGAG GGCTGGCGAG AGGCCGTGAC CGGCCACGGA
CCGGCCTATC GCTACCGGGG GCCCGGCGGG CACCTGCACG AGGTCTTCTG GGAGGTGGAG
CGGTGGCAGG CGCCGCCCGA GCTCGCGACG GATTTCCCCG GCAGGCCGCA GAAGTATCCC
CGAAGCGGCG TCTGCCCGCG CTACATAGAC CACGTGACGG TGGCCACGCC AGACGTAATG
GCCGAGGCCA GGTGGCATCA GCAGACCGTG GGGCTCAAGT TTACGGACTA CATCGTGCCC
GAGGAAGGCT CGGACTTCGT GGTCTTCGCG ACGCTGACGA GCCACTCGAC GCACGAGCTG
GGGCTCGTGC CCGAGACCTC GGAGGCGCGC GGGCGGGTCA ACCACGTGGC CTTCTGGCTC
GAGCAGCGTT CGGACGTGGA GCGGGCCTCC CGGGTCCTCA TGGACGCGGG CACGCCGATC
GAGTTTGGTC CGGGTGTTCA CGGGATCGAC GAGATCACCT ACCTCTATGT GCGCGAGCCC
GGTGGAATGC GCGTCGAGCT CAACTCCGGT GGCAGGAGAC TCCTCGAGCC CGACTGGCAG
ACCAGGCGCT GGACGCCCGC GCAGGGGGCG ATGAGCGCCT ACCGCAACAT CGGCATGCCC
GAGTCGATGA TGGAGTCCTT CCCGATGCCG GAGAAAGCCG GGGACCTGTA CGAGACCGGC
CTCTTCAGCA GGTAG
|
|---|
| Protein sequence | MSQGEVGADG RGAAGNLNEA RHLISRLAHV EISSPRPEES VRWFTDVLGL QESGREGQSV
YLRAWGEFFH HSLVVTEGPE PALLHVGWRT SGPEELERAV ERIERTGMGE GWREAVTGHG
PAYRYRGPGG HLHEVFWEVE RWQAPPELAT DFPGRPQKYP RSGVCPRYID HVTVATPDVM
AEARWHQQTV GLKFTDYIVP EEGSDFVVFA TLTSHSTHEL GLVPETSEAR GRVNHVAFWL
EQRSDVERAS RVLMDAGTPI EFGPGVHGID EITYLYVREP GGMRVELNSG GRRLLEPDWQ
TRRWTPAQGA MSAYRNIGMP ESMMESFPMP EKAGDLYETG LFSR
|
|---|
| |