Gene Rxyl_2238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2238 
Symbol 
ID4115188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2247896 
End bp2248858 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content69% 
IMG OID638037024 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_644987 
Protein GI108805050 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATCG TCCGGTATGA GACCGGCGGC ATCGAGAGGC TGGGTGTCGT TTCGGGCGAG 
GAGATCGGGC CTTTGCCGGA GGGCACCGAC GTGCTCGACC TGCTCGCCGC GGATCCCGAA
GAACGAGACC GGATCGCCCG GACCGCGGAG GCATCGGTCC CGCTCACCGG GGTTCGGCTT
CTCGCCCCGC TGCAGCCGCC CACCCTCAGG GACTTCGTCG TCTTCGAGGA GCATGTGGAG
GGCATCACCA GGAGTGTCTC GGAGGAGGGG GGAGTGCCCG AGGCCTGGTA CGAGATCCCC
ACCTTCTACT TCGGCAACCC CTACTCCGTG ATCGGCCCCC AGGACCCGGT GGCGGTTCCG
CCCGGCTGCG AGGCCCTGGA CTTCGAGCTG GAGGTCGCCG CGATAATCGG CAGGGCCGGA
AGCAACCTTG CCCCCGAGGA GGCAAGAGGG CACATCGCGG GCTACACGAT CTTGAACGAC
TGGTCCGCCC GCGACCTCCA GCGCCACGAG ATGCAGATCG GCCTGGGGCC GGCCAAGGGC
AAGGACTTCG CCAACACCCT GGGGCCCTGG ATCGTGACCT CGGACGAGCT CGAGCCCTAC
CGCCGCGACG GCCGCCTGCA CCTCGAGATG GAGGTCTTCG TGAACGGCGA GAAGCTCGGC
GACGACACCC TGGCCAACAT GGCGTGGTCG TTCGAGGAGC TGGTCGCCTA CGCCTCGCGC
GGCACCTGGG TCAGGCCGGG CGATGTCTTG GGCTCCGGGA CCTGCGGCTC CGGATGTCTC
GCCGAGCTGT GGGGGAGGGT CGGAAGGCAA GAGCCCCCGC TGCTCGAGCC TGGTGACGTG
GTGAGGATGA CGGTCGAGGG GATCGGGACC ATCGAGAACC GGGTGGTCGA AGGCGTCTCC
CCCGTGCCCA TACCCCGCGC GAGGCCCGCC GCCTTCAGGA GGATGCGGTC GTGGGGCGCG
TAG
 
Protein sequence
MRIVRYETGG IERLGVVSGE EIGPLPEGTD VLDLLAADPE ERDRIARTAE ASVPLTGVRL 
LAPLQPPTLR DFVVFEEHVE GITRSVSEEG GVPEAWYEIP TFYFGNPYSV IGPQDPVAVP
PGCEALDFEL EVAAIIGRAG SNLAPEEARG HIAGYTILND WSARDLQRHE MQIGLGPAKG
KDFANTLGPW IVTSDELEPY RRDGRLHLEM EVFVNGEKLG DDTLANMAWS FEELVAYASR
GTWVRPGDVL GSGTCGSGCL AELWGRVGRQ EPPLLEPGDV VRMTVEGIGT IENRVVEGVS
PVPIPRARPA AFRRMRSWGA