| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2165 |
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| Symbol | |
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| ID | 4114819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2181993 |
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| End bp | 2182685 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638036951 |
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| Product | 50S ribosomal protein L1P |
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| Protein accession | YP_644921 |
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| Protein GI | 108804984 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0086429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGCA AGAGGCTGCT GGAGCAGAGG GCGAGGGTCG AGCGGGAGAG GCTCTACTCC
CCGCGGGAGG CGCTGGAGCT GCTGAAGGAG CTCGACGGCG CCCGCTTCGA CGAGACGGTG
GAGGCGCACG TCCACCTCAA CGTGGACCCG CGCCGGGCGG ACCAGATGGT GCGCGGCACC
CTGATGCTGC CCAACGGCAC GGGCAAGACG CGCCGGGTGG CGGTCTTTGC GGTGGGCGAG
AAGGCCCGGG AGGCCGAGGA GGCCGGCGCG GATATCGTGG GCTCCGAAGA GCTCGCCGCC
CGGATACAGA ACGAGGGCTT CATGGACTTC GACGTGGCGG TGGCCACCCC GGACCAGATG
AGCATCGTCG GGCGGCTGGG GCCGATCCTG GGTCCCCGCG GCCTGATGCC GAACCCGAAG
AGCGGGACGG TGACCATGGA CGTCGGTCGG GCCGTGGAGG AGATAAAGCG GGGCAAGGTG
GAGTACCGGG TGGACCGCTA CGGGATCATC CACACCGTGC TCGGCAAGAA GTCTTTCGAC
GTGGACAGCC TGCTCGAGAA CTACTTCGCG CTGCGCGAGG AGCTGGTGCG GGCCCGCCCG
GCGGCGGTGA AGGGCCGCTA CATCAAGTCC GTGGCCTTCA CCACCACCAT GGGGCCTTCG
GTGAAGGTTG ACCCCTCGGT GGAGAGGGAG TAA
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| Protein sequence | MAGKRLLEQR ARVERERLYS PREALELLKE LDGARFDETV EAHVHLNVDP RRADQMVRGT
LMLPNGTGKT RRVAVFAVGE KAREAEEAGA DIVGSEELAA RIQNEGFMDF DVAVATPDQM
SIVGRLGPIL GPRGLMPNPK SGTVTMDVGR AVEEIKRGKV EYRVDRYGII HTVLGKKSFD
VDSLLENYFA LREELVRARP AAVKGRYIKS VAFTTTMGPS VKVDPSVERE
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