| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2161 |
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| Symbol | |
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| ID | 4114815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2173406 |
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| End bp | 2177293 |
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| Gene Length | 3888 bp |
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| Protein Length | 1295 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638036947 |
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| Product | DNA-directed RNA polymerase subunit beta' |
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| Protein accession | YP_644917 |
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| Protein GI | 108804980 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAGGCTT TGGAGCGCGA TATCGACATA AACAGGCTAG AGAAGATCTC CATCGGCCTC
GCCTCGGCCG ATGAGATCCG GGAGTGGTCC CGCGGCGAGG TCACCAAGCC GGAGACCATA
AACTACCGGA CGCTGCGGCC GGAGAAGGAT GGCCTGTTCG ACGAGCGCAT CTTCGGTCCC
ACCAAGGACT GGGAGTGCTA CTGCGGCAAG TACAAGAGGA TCCGCTTCAA GGGCATCATC
TGCGAGCGCT GCGGGGTGGA GGTTACCCGG GCGCGCGTCC GGCGCGACCG GATGGGCCAC
ATCGAGCTGG CCGCCCCGGT GGCGCACGTG TGGTTCGTGA AGGGCGTGCC CAGCCGGATG
GGGTATCTGC TGGACATCAG CCCCAAGGAT CTCGACCGGG TGCTCTACTT CGCCAGCTCC
ATCGTCACCT GGGTCGACCG GGAGGGCCGG GCCAACGACA TCGACCGGCT CCGGCAGCAG
GTGGAGGAGG AGATCCGGCA GATAGAGCAG GACCGGGACG AGGAGATCAC CGCCGCCCAG
GCCCTGCTCA CCAAGCGGAT CAGCGTGATC AAGGGCGAGA GCAGCCCGGA CGAGCTCACC
GAGGACTACG CGGACGTTCC CGAGGAGGAG CGTGAGGAGG CCATAGCCCG GGCCCGGCGG
GAGGCCGAGG AGACCATCGA GGACATCAAG CGCTCGATGG ACGAGCAGAT CGAGCTCATC
CGCCGGGCGT GGGAGGAGTT CCAGACGCTC GAGCCGCGCC AGATCGTGGA CGACGAGGAG
CTCTTCCGCG AGATGAAGGA CCGCTTCGGG GACGAGTACG GCTACGGCGT GTACTTCCGG
GGCGGCATGG GTGCCGAGGC CATCCGGGAC CTGATCCGCC AGGTGGACCT GGAGAAGGAG
GCGCGGGAGC TGCGGCAGGT CGTGGGCGAG TCCCGCGGCC AGAAGCGCCA GAAGGCCATA
AAGCGCTTGA AGGTGGTGGA CGCCTTCCGC ACCAGCGGCA ACAAGCCGGA GTGGATGATC
CTCGATGCCA TCCCTGTGCT GCCGCCGGAT CTCAGGCCGA TGGTGCAGCT GGACGGCGGC
CGGTTCGCCA CCAGCGACCT CAACGACCTC TACCGCAGGG TCATAAACCG GAACAACCGC
CTCAAGCGGC TGCTGGACCT CGGCGCGCCG GACGTCATCG TCAACAACGA GAAGCGGATG
CTGCAGGAGG CCGTCGACGC CCTCTTCGAC AACGGACGCC GCGGCCGGGC GGTCACCGGC
GCGGGCAACC GGCCCCTGAA GTCCCTCTCG GACATGCTCA AGGGCAAGCA GGGCCGCTTC
CGGCAGAACC TGCTGGGCAA GCGCGTGGAC TACTCCGGCC GCTCGGTCAT CGTGGTCGGC
CCGCAGCTGG AGATGCACCA GTGCGGCCTG CCGCGCCTGA TGGCGGTCGA GCTGTTCAAG
CCGTTCGTGA TGAAGGTGCT GGTCGACCGC GCGCTCGCGC CGAACATCCG CAGCGCCAAG
CAGATGGTGG AGCGGCTCAG GCCCGAGGTG TGGGACGTGC TGGAGGACGT GATCAAGGAG
CACCCCGTGC TCCTGAACCG CGCCCCCACG CTGCACCGCC TGGGCATCCA GGCCTTCGAG
CCGGTCCTGG TGGAGGGGAA GGCCATCCAG ATCCACCCGC TGGTCTGCGC GGCGTTCAAC
GCGGACTTCG ACGGCGACCA GATGGCGGTG CACGTGCCCC TGAGCCCCGA GGCGCAGGCC
GAGGCGCGCA TCCTGATGCT CTCGACTCAG AACATCCTGA AGCCGGCCGA CGGCTTCCCG
GTGGCCGTGC CCTCCCAGGA CATGGTGCTC GGCCTCTACT ACATCACCTA CGCCGGGGAG
GACTTCGAGG AGCGCGAGCC CAAGGCGCTG CTGGCCTCCT ACGCCGAGGC GGACAACGCC
TACCGCGAGG GCTCGCTCCG GCTGCACGAC AAGGTCATCC TCCGGCGCGA GGGCGAGAGG
ATCGAGACCA CCCTCGGGCG GGTACTCTTC AACGAGAGCA TCGAGCGCAC CCTGCGCGGC
TACCTGGGCG ACGCCTACAA CCCCGCCGCC TACCGCTTCG TCAACCACGA GCTGAAGAAG
GGCGAGATAA AGCAGCTCGT CCAGCAGTAC GTCGAGCGCT ACCCGACCGA GCTAGTCAGC
CAGCTCCTCG ACACCCTCAA GCACGTGGGC TTCCACACCG CGACGCTCGC CGGCATCTCC
ATCGGCAAGA ACGACATCGT CGTCCCCGAG CAGAAGCGCG AGATCCTCGA GAAGTACGAG
AAGCTGGTGG AGGAGGTCGA GGAGCAGTGG GAGGCCGGCT TCATCTCCGA TGAGGAGCGC
GCCGAGCGGG TCATCGGCCT GTGGACGCAG GCCAAGAACG AGGTCGAGGA GGCCATGAAG
GCCAACCTCT GGAAGCTCAA CCCGATCTAC ATGATGGCCA ACTCGGGCGC CCGCGGCAGC
TACTCCCAGA TAACCCAGCT GGCCGGGATG CGCGGCCTGA TGACCAACGC GAAGGGCGAG
ATCATCGACG AGCCGGTGAA GTCCAACTTC ATGGAGGGCC TCACGGTGCT GGAGTACTTC
ACCTCCACAC ACGGGGCCCG GAAGGGGCAG GCGGACACCG CCCTGCGTAC CGCCGACTCG
GGCTACCTGA CCCGCCGGCT CGTGGACGTC GCCCAGGACG TGGTGATCCG GGAGGAGGAC
TGCGGCACCG ACGGGTACAT CGAGCTGCCG CTCTACCTGG AGGACGGGCA GGGCGACCCG
AACGACTCCG TGGCCGCCCG CTACCTGGCG CGCGACCTCG TCAACCCGGA GACGGGCGAG
GTGGTCGCCG AGGCCGGCAC GGACATCACC CGGCCGCTGT TCGAGGCCTG GCTGGAGGAG
CTGCCGCGGG AGACGAAGGT GCCGGTCCGC ACCCCGACCA AGTGCGAGAA CCCGCACGGC
GTCTGCCAGA AGTGCTACGG GCGCTCGCTG GCCACCAACC GCCCGGTGGA CGTGGGCGAG
GCCGTCGGCA TCATCGCCGC GCAGTCCATC GGCGAGCCGG GCACCCAGCT CACCATGCGC
ACCTTCCACA CCGGCGGCGT CTCGGGCGTG GAGGACATCA CCGCCGGTCT GCCGCGGGTG
GTCGAGCTGT TCGAGGCCCG GCACCCGAAG GGCGAGGCGG TCATCAGCGA CATCGACGGC
ATCGTGAGCC TGGAGGAGAC CGACTCCGAG CGGCTCGTCA GGGTCGTGGT GACCGCGCCC
GACGGCTCCG AGGCCCGCGA GTACCGGGTC GAGCGGCAGC TGCTGCGCCC CGAGATCGTG
GACGGCGCCG AGATCCGGGC GAACACCCCG ATCACCGAGG GGTCGCTCTA CCCGCACCAG
ATCCTGGAGA ACGACCTGCG CTACGGGCGC GGCACCACCG CCACCGAGCG CTACCTGGTC
GACGAGGTGC AGAAGGTCTA CCGGGCGCAG GGCGTGGACA TCCACGACAA GCACATCGAG
ATCATCGTGC GCCAGATGCT CCGCAAGGTG CTCGTGGAGG AGCCGGGCGA CACCAGGTTC
CTGCCGGAGC AGGTGGCCGA CCGCTTCTCG GTGCTCGCGG AGAACGAGCG GGTCGAGGAG
GAGGGCGGAC GCCCCGCCGA GTTCCACACG ATCCTGATGG GGATCACCAA GGCCTCGCTC
GCCACCGAGA GCTTCCTCTC GGCCGCCTCC TTCCAGGAGA CCGCCCGCGT CCTGACCGAC
GCGGCCATCG AGGGCAAGGT GGACAACCTC ACCGGCCTGA AGGAGAACGT GATCATCGGC
AAGCTCATCC CGGCCGCCAC CGGCCTGCCG AAGTACCGCA GGCTCACGGT GACCGTGGAG
GGCTACCGGG CCGACGACGT CGACGAGCTG GACATAGCGG CCTCCTGA
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| Protein sequence | MQALERDIDI NRLEKISIGL ASADEIREWS RGEVTKPETI NYRTLRPEKD GLFDERIFGP
TKDWECYCGK YKRIRFKGII CERCGVEVTR ARVRRDRMGH IELAAPVAHV WFVKGVPSRM
GYLLDISPKD LDRVLYFASS IVTWVDREGR ANDIDRLRQQ VEEEIRQIEQ DRDEEITAAQ
ALLTKRISVI KGESSPDELT EDYADVPEEE REEAIARARR EAEETIEDIK RSMDEQIELI
RRAWEEFQTL EPRQIVDDEE LFREMKDRFG DEYGYGVYFR GGMGAEAIRD LIRQVDLEKE
ARELRQVVGE SRGQKRQKAI KRLKVVDAFR TSGNKPEWMI LDAIPVLPPD LRPMVQLDGG
RFATSDLNDL YRRVINRNNR LKRLLDLGAP DVIVNNEKRM LQEAVDALFD NGRRGRAVTG
AGNRPLKSLS DMLKGKQGRF RQNLLGKRVD YSGRSVIVVG PQLEMHQCGL PRLMAVELFK
PFVMKVLVDR ALAPNIRSAK QMVERLRPEV WDVLEDVIKE HPVLLNRAPT LHRLGIQAFE
PVLVEGKAIQ IHPLVCAAFN ADFDGDQMAV HVPLSPEAQA EARILMLSTQ NILKPADGFP
VAVPSQDMVL GLYYITYAGE DFEEREPKAL LASYAEADNA YREGSLRLHD KVILRREGER
IETTLGRVLF NESIERTLRG YLGDAYNPAA YRFVNHELKK GEIKQLVQQY VERYPTELVS
QLLDTLKHVG FHTATLAGIS IGKNDIVVPE QKREILEKYE KLVEEVEEQW EAGFISDEER
AERVIGLWTQ AKNEVEEAMK ANLWKLNPIY MMANSGARGS YSQITQLAGM RGLMTNAKGE
IIDEPVKSNF MEGLTVLEYF TSTHGARKGQ ADTALRTADS GYLTRRLVDV AQDVVIREED
CGTDGYIELP LYLEDGQGDP NDSVAARYLA RDLVNPETGE VVAEAGTDIT RPLFEAWLEE
LPRETKVPVR TPTKCENPHG VCQKCYGRSL ATNRPVDVGE AVGIIAAQSI GEPGTQLTMR
TFHTGGVSGV EDITAGLPRV VELFEARHPK GEAVISDIDG IVSLEETDSE RLVRVVVTAP
DGSEAREYRV ERQLLRPEIV DGAEIRANTP ITEGSLYPHQ ILENDLRYGR GTTATERYLV
DEVQKVYRAQ GVDIHDKHIE IIVRQMLRKV LVEEPGDTRF LPEQVADRFS VLAENERVEE
EGGRPAEFHT ILMGITKASL ATESFLSAAS FQETARVLTD AAIEGKVDNL TGLKENVIIG
KLIPAATGLP KYRRLTVTVE GYRADDVDEL DIAAS
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