Gene Rxyl_2138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2138 
Symbol 
ID4114734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp2160503 
End bp2161105 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content73% 
IMG OID638036924 
ProductSSU ribosomal protein S5P 
Protein accessionYP_644894 
Protein GI108804957 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0665154 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGGACGAC CGAGAACGAG CCAGACCAGG GGGCAGGGTC CCTCCGGGGC GACCGGGGGC 
AACCCCCGGG GCGGCGGGAG CACCACCCGC GAGCGCGACG CCCGCGGGGC CCGGCCCGGC 
GAGCGCGACG GCGGCTCCGA GATCCAGGAC CGGGTCGTCC AGATCCGGCG GGTGGCCAAG 
GTCAAGAAGG GCGGCCGGCG GCTGAACTTC AGCGCGCTGG TGGTCGTGGG CGACGGCCAG 
GGCAGGGTCG GGGTGGGCCT CGGCAAGGCC AACACGGTGC CCGCCGCGAT CGCCAAGGGC 
CAGGAGAAGG CGCGGCACGC GATGTTCGAC GTCCCGATGC GCAACACGAC GATCCCCCAC 
GAGGTGGTCG GGGAGTACGA GAGCTCGCGG GTGCTGCTGA AGCCGGCCTC CGAGGGTACC 
GGCGTGATCG CCGGCGGGGG GGTGCGCGCG GTGCTGGAGC TCGCCGGGAT AAAGGACGTG 
CTGACCAAGG CGCTCGGCTC GACGACGCCG GTCAACCTGG TGCGGGCGAC CGAGGACGGG 
CTCAGGCAGC TGCGCACCAA GGCCCAGATC GAGCAGATCA GGGGGGTGAA GGTCCGGCTA 
TGA
 
Protein sequence
MGRPRTSQTR GQGPSGATGG NPRGGGSTTR ERDARGARPG ERDGGSEIQD RVVQIRRVAK 
VKKGGRRLNF SALVVVGDGQ GRVGVGLGKA NTVPAAIAKG QEKARHAMFD VPMRNTTIPH 
EVVGEYESSR VLLKPASEGT GVIAGGGVRA VLELAGIKDV LTKALGSTTP VNLVRATEDG 
LRQLRTKAQI EQIRGVKVRL