Gene Rxyl_2083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2083 
Symbol 
ID4115177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand+ 
Start bp2112452 
End bp2113123 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content77% 
IMG OID638036870 
ProductABC transporter related 
Protein accessionYP_644840 
Protein GI108804903 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.790861 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCCCGG GCGAGTTCCT CGCCCTCATC GGGCCCTCCG GGGCCGGCAA GTCCACCCTG 
CTCGGCGTGC TCGCCGGGCT CGAGCCCCCC GACGAGGGAG AGGTGCTCCT CGACGGGAGG 
CCCCTGACCC GCCCGGGGCT CGTGGCGTAC ATGCCCCAGA GCGACCTCCT CCTCCCCTGG 
AGGAGCGTGG TCGCGAACGT GGCGCTGGGA CTCGAGGCCG CCGGGACGCC GAGAGAGGCG 
GCCCGCAAGC GGGCGCGGGC CGCCCTCACG CGCTTCGGGC TCGAGGAGTT CGCCGACGCC 
CCGCCCGAGG CCCTCTCCGG CGGGATGCGC TCGCGGGCCG CCCTGCTCCG GACCGCCCTG 
CTCGGCCGCG ACGCCATGCT GCTCGACGAG CCGTTCGGCG CCCTCGACGC CCTCACCCGC 
CGCGACCTGC AGGGGTGGCT GCTCGGAGTC CGCGACGAGC TGGCCGCCAC CATCGTGCTC 
GTCACCCACG ACGTGGACGA GGCCCTGCTG CTCGCCGACA GGGTGGTCGC GCTCACCCCG 
CGCCCCGCCC GGGTCGCCCT GGAGCTGGAG GTGGGGCTGC CGCGGCCGCG CACCATGCGG 
GACGAGACCA CCGGTGAGTT CGCCCGGCTC AAGGGGCGTC TGCTCGAGGC GCTGGGGGTG 
GCGGGAGGGT GA
 
Protein sequence
MAPGEFLALI GPSGAGKSTL LGVLAGLEPP DEGEVLLDGR PLTRPGLVAY MPQSDLLLPW 
RSVVANVALG LEAAGTPREA ARKRARAALT RFGLEEFADA PPEALSGGMR SRAALLRTAL 
LGRDAMLLDE PFGALDALTR RDLQGWLLGV RDELAATIVL VTHDVDEALL LADRVVALTP 
RPARVALELE VGLPRPRTMR DETTGEFARL KGRLLEALGV AGG