| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2082 |
|---|
| Symbol | |
|---|
| ID | 4115176 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 2111063 |
|---|
| End bp | 2112112 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638036869 |
|---|
| Product | pyrophosphate-dependent phosphofructokinase |
|---|
| Protein accession | YP_644839 |
|---|
| Protein GI | 108804902 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0205] 6-phosphofructokinase |
|---|
| TIGRFAM ID | [TIGR02483] phosphofructokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAGG TACGCAGGGT AGGCATGCTC ACCGGCGGCG GGGATGCTCC GGGGTTGAAC
GGTGTGATCC GGGCCGTCAC CGTCAAGTGC GTCGAGGACT ACGGCTACGA GGTCGTCGGC
ATAAAGCGCG GCTGGAGAGG GCTCCTGGCC CCCCAGGAGG ACTCAGTGGA GAAGCTCACC
GTGGACGGCG TCCGCTACAT CCTGGACGAG GGCGGCACCG TTCTCCTCTC TTCCCGGACC
AACCCGTACA AGAAGGAGGG GGACGCCGAG AAGGTCGTAA AGAACATGCA GGAGTTCGGC
ATCGACGCCC TCGTGGCCAT CGGCGGGGAC GACACCCTGG GGGTGGCCAG CCGGCTCCAC
AAGGACTTCG GGGTGCAGGT GGTCGGCTGC CCCAAGACCA TAGACAACGA CCTCTCCGGC
ACCGACATCT GCTTCGGCTA CGACACCGCC GTCTCCATCG CCACCGAGGC CCTCGACCGG
GTCAGGACCA CCGCAAAGAG CCACGAGCGC ATCCTGGTCG TAGAGATCAT GGGCCGGCAC
GCCGGTTGGA TCACCTACGG GGCCGGGCTG GCCGGGGCGG CAAACGTCAC CCTCATCCCC
GAGGTCGAGC CGGACATCGA CGCCATCGCC GACCTCTTCA AGAAGCGGGC CGAGCGGGGC
GAGCGCTGGG GCGTCGTCGC GGTGAGCGAG GGGGTCACCA TCGGCGAGGA GTACATCACC
CAGAGCGCCG AGCGCGACGA GTTCGGGCAC GTCCGCCTCG GCGGCATCGG CGAGACGCTG
GCCAAAGAGC TCAAGGAGCG CACCGGCATA GACACCCGCC ACGTCGTCCT CGGGCACCTG
CAGCGCGGCG GCACCCCCAC CGCCTACGAC CGCATCCTCT CCACCCGCTA CGGCCTGCGG
GCCGCCGAGG CGGTCAAGAA CGGCGAGTGG GGCAAGATGG TCGCCCTGCG CGGCAGCGAC
ATCGTCACCG TCCCGCTGGA GGAAGCCACG GGGGAGACCC GCACCGTCCC GGAAGACCTC
TACGGGGTCC TGAAGACCTT CTTCGGCTAG
|
|---|
| Protein sequence | MAEVRRVGML TGGGDAPGLN GVIRAVTVKC VEDYGYEVVG IKRGWRGLLA PQEDSVEKLT
VDGVRYILDE GGTVLLSSRT NPYKKEGDAE KVVKNMQEFG IDALVAIGGD DTLGVASRLH
KDFGVQVVGC PKTIDNDLSG TDICFGYDTA VSIATEALDR VRTTAKSHER ILVVEIMGRH
AGWITYGAGL AGAANVTLIP EVEPDIDAIA DLFKKRAERG ERWGVVAVSE GVTIGEEYIT
QSAERDEFGH VRLGGIGETL AKELKERTGI DTRHVVLGHL QRGGTPTAYD RILSTRYGLR
AAEAVKNGEW GKMVALRGSD IVTVPLEEAT GETRTVPEDL YGVLKTFFG
|
|---|
| |