| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2064 |
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| Symbol | |
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| ID | 4115776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2094156 |
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| End bp | 2095766 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638036851 |
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| Product | malate synthase |
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| Protein accession | YP_644821 |
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| Protein GI | 108804884 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01344] malate synthase A |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.889002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGAA AGCGTTCCTT CCCCGAGGGC GTGGAGTTCA CCGCTCCCAT CCCTGAGGAG
TATGCGGACG TGCTCTCGCC CGACGCGGTG AGCTTTGTGG CCGGGCTGGC CCGGGAGTTC
ACGGGCCGGG TGGACGAGAT TCTGGCGGCG CGGCAGGAGC GTCAGCTGCG GATCAACGCC
GGCGAGATGC CGGACTTCCC CTCGGAGACG CGGGAGGTGC GGGAGTCCGA GTGGCGGGTG
GCGCCGGCGC CGCCCGACCT GCAGGACCGC AGGGTGGAGA TCACCGGCCC GCCGGACAGG
AAGATGCTGA TCAACGCGCT GAACTCCGGG GCCAGCACCT ACATGACCGA CCTGGAGGAT
GCCAACTGCC CCACCTGGCG GAACATGCTG GAGAGCCAGT ACAACATCCG GGACGCGGTG
AGGGGGACCA TCACCTACGA CGACCCCAAC ACCGGCAAGC ACTACGAGCT GGGGGAGGAG
CTGGCCACCC TCATCGTCCG GCCGCGGGGC TGGCATCTCT TCGAGAAGCA CATGCTGGTG
GACGGCCGGC AGGTACCGGG GGCCCTCTTC GACTTCGGGC TGGCGTTCTT CCACAACGCG
GGGCGGCTCA TCGAGAACGG CAGCGGCCCC TACTACTACC TGCCCAAGCT CGAGGGCTAC
CGGGAGGCCC GGCTCTGGAA CGACGTCTTC AACATGGCGC AGGACGAGCT CGGCATCCCG
CGGGGGACCA TCAGGGCCAC CGTGCTGGTG GAGACCATCC TGGCCACCTT CGAGATGGAC
GAGATCCTCT ACGAGCTGCG CGACCACTCC TCGGGCCTCA ACGCCGGGCG CTGGGACTAC
ATCTTCAGCT ACATAAAGAA GTTCCGCGAG CACGAGGACC GGCTGCTGCC CGACCGGGCG
CAGGTGACCA TGACCGTGCC GTTCATGCGC GCCTACACCC AGCTTCTGGT GAAGGTCTGC
CACCGGAGGG GGGCGCACGC CATAGGCGGG ATGGCCGCCC AGATACCGGT CAAGGACGAC
CCGAAGAAGA ACGAGGAGGC CTTCGCCAAG GTCCGCGCCG ACAAGGAGCG CGAGGCCCGC
GACGGGCACG ACGGCACCTG GGTGGCCCAC CCGGCGCTCG TCCCGGTCGC CAAGGAGGTC
TTCGACGAGT ACATGCCGCA GCCCAACCAG ATCGAGACCA AAAAGCGCGA GGACGTGCAC
GTCACGGCCG AAGACCTGCT GGAGCGCCCG GAGGGCACCA TCACCATGGA CGGCTTCCGC
AACAACATCA GCGTGGGCAT CCAGTACCTC GGCGCCTGGT TCTCCGGCCG CGGCGCGGTG
CCCGTCTTCA ACCTCATGGA GGACACGGCG ACCGCCGAGA TCAGCCGGGC CCAGGTGTGG
CAGTGGATCC ACCACCCCAA GGCCGTCCTC GACGACGGCA CCAAGGTCAC GAAGGAGCTC
TTCCACAGGG TGATGGCCGA GGAGGTCGAG AGGATCCGGG AGGAGATCGT CGGCCCCGAG
CGCTTCCGGC GCGACCGCTT CGATACCGCC ATCGAGTTCT TCGACCGGAT CTCCACCCAG
GACGAGTTCG TCGAGTTCCT GACCCTGCCC GGTTACGACT ACCTGGAGTA G
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| Protein sequence | MARKRSFPEG VEFTAPIPEE YADVLSPDAV SFVAGLAREF TGRVDEILAA RQERQLRINA
GEMPDFPSET REVRESEWRV APAPPDLQDR RVEITGPPDR KMLINALNSG ASTYMTDLED
ANCPTWRNML ESQYNIRDAV RGTITYDDPN TGKHYELGEE LATLIVRPRG WHLFEKHMLV
DGRQVPGALF DFGLAFFHNA GRLIENGSGP YYYLPKLEGY REARLWNDVF NMAQDELGIP
RGTIRATVLV ETILATFEMD EILYELRDHS SGLNAGRWDY IFSYIKKFRE HEDRLLPDRA
QVTMTVPFMR AYTQLLVKVC HRRGAHAIGG MAAQIPVKDD PKKNEEAFAK VRADKEREAR
DGHDGTWVAH PALVPVAKEV FDEYMPQPNQ IETKKREDVH VTAEDLLERP EGTITMDGFR
NNISVGIQYL GAWFSGRGAV PVFNLMEDTA TAEISRAQVW QWIHHPKAVL DDGTKVTKEL
FHRVMAEEVE RIREEIVGPE RFRRDRFDTA IEFFDRISTQ DEFVEFLTLP GYDYLE
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