Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2060 |
Symbol | |
ID | 4115772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2088363 |
End bp | 2090141 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638036847 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_644817 |
Protein GI | 108804880 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCCGG AGGCAGAGGA GCTCGGAGGG ATAGGGAACC TGGTTGAGGC CCTGCACCGG AACGCCGTGG GGCGCGGGGG CAAGGGTGCC CTGCACCGCA AGGTCGGGGG GCGGTGGGAG GCCGTCTCCT ACGGGGAGCT CTACGGGATG GTGCGGGACT TTGCCGCCGG GCTGGCCGGG CTCGGGGTCG GCCGGGGGGA CAGGGTCGGC CTCATCGCGC GCAACCGGGT CGAGTGGGCG GTGACCGACT TCGCGGTGCA GAGCCTCGGG GCGGCGACGG TGCCGGTCTA CCCGACGCTG GAGCCGGAGC AGATGGCGCA CATCCTCGCC GACTGCGAGG CCCGGGTGGT CGTGGTCGAG GACGGGGAGC TGCTGGGGCG GGTCTCCTCG GCGAGGGGGG AGCTTCCGGC GCTGGAGCAC GTGGTCGTGA TGGAGGGGGA GGGGGCCACC CTCTTTGAGG AGGTGCTGCG GGAGGGGCGG GAGCGGCCCC TCGAGGGCTG GGAGGAGGGC TGGCGCTCGC TCGGCCGGGA GGACGTGGCG ACGATCATCT ACACCTCCGG GACGACCGGG AGGCCCAAGG GGGCCGTCCT CACCCACGGC AACATCCTCT CCAACCTGGA GGGCATCCAG GACGCGCTCA CCGTCTACCC GGAGGACGTC TTTCTCTCCT TTCTGCCGCT CTCGCACGTC TTCGAGCGCA CCTGCGGGCA GTTTCTCGCG CTCGGCGTCG GGGCGAGCGT CTACTACGCC GAGTCGGTGG AGAAGGTGCC GGAGAACCTG CGCGAGGTGC GGCCCACCGT CATGCCCAGC GTGCCCCGGC TCTACGAGAA GATGCACGAC CGGGTGCGGG CCATGGTCGC CGGGGGTTCG CCGGTCAAGC GCTGGCTCTT CGGGCGGGCG GTGGCGGCCG GGAGGCGGCG CTACGAGGTT CTGGACCGGG GGGGCCGGCC GGGCCTGCCG CTGCGGGCCG CGCTCGCCGT CTACGACCGG CTCGTCTTCC GGCGGCTCAG GGAGGCCGTG GGCGGGAGGG TGCGCTTCTT CGTCTCCGGC GGGGCCAAGC TGGACACCGA GGTGGGGAAG TTCTTCTACG CGGCCGGGAT AAAGATCATG GAGGGCTACG GGCTCACCGA GACCTCGCCC GTCATCGCCT GCAACCGGCT CGAGAAGCCG CGCTTCGGGA CCGTTGGGTT GCCGCTCTCC AATTTGGAGG TCAGGATCTC CCCGGAGGGG GAGATCCAGG TGCGGGGGCC GAGCGTCATG CGGGGGTACT TCCGGGACGA GCGGTCCACC GAGGAGGCCT TCACGCAGGA CGGCTTCTTC CGCACCGGGG ACATCGGCTC CTTCGACGAG GACGGCTACC TCACCGTGAC CGACCGGCTC AAGAGCCTCA TCGTGCTCAG CACCGGCAAG AACGTCGCCC CCCAGCCCAT CGAGTCCGCG CTGGTCACGG CCCCCCACAT CTCGCAGGCC GTGGTCGTCG GCGAGGGGCG CAAGTACGTC TCGGCCCTCG TGGTCCCCGA CTACCGGGCC GTGCGGGCGA CCCTCGGTGT GGGGGGGACC GACGAGGAGC TCGCCGGGGA CGGGCGCGTG CAGCGGCTCA TCGAGCGCGA GGTCGAGGAG GCCACGCGGG GGTTCGCCGA CTACGAGCGG CCCAAGAAGG TCGCCCTGCT GCCGCGCGAG CTCTCGCAGG AGGCGGGGGA GCTCACCCCG ACCCTCAAGG TCAAGACCCG GGTCGTGCAG CGGCGCTACG GGGGTTACAT AGAGAGGCTC TATGCGTGA
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Protein sequence | MRPEAEELGG IGNLVEALHR NAVGRGGKGA LHRKVGGRWE AVSYGELYGM VRDFAAGLAG LGVGRGDRVG LIARNRVEWA VTDFAVQSLG AATVPVYPTL EPEQMAHILA DCEARVVVVE DGELLGRVSS ARGELPALEH VVVMEGEGAT LFEEVLREGR ERPLEGWEEG WRSLGREDVA TIIYTSGTTG RPKGAVLTHG NILSNLEGIQ DALTVYPEDV FLSFLPLSHV FERTCGQFLA LGVGASVYYA ESVEKVPENL REVRPTVMPS VPRLYEKMHD RVRAMVAGGS PVKRWLFGRA VAAGRRRYEV LDRGGRPGLP LRAALAVYDR LVFRRLREAV GGRVRFFVSG GAKLDTEVGK FFYAAGIKIM EGYGLTETSP VIACNRLEKP RFGTVGLPLS NLEVRISPEG EIQVRGPSVM RGYFRDERST EEAFTQDGFF RTGDIGSFDE DGYLTVTDRL KSLIVLSTGK NVAPQPIESA LVTAPHISQA VVVGEGRKYV SALVVPDYRA VRATLGVGGT DEELAGDGRV QRLIEREVEE ATRGFADYER PKKVALLPRE LSQEAGELTP TLKVKTRVVQ RRYGGYIERL YA
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