Gene Rxyl_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2060 
Symbol 
ID4115772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2088363 
End bp2090141 
Gene Length1779 bp 
Protein Length592 aa 
Translation table11 
GC content72% 
IMG OID638036847 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_644817 
Protein GI108804880 
COG category[I] Lipid transport and metabolism 
COG ID[COG1022] Long-chain acyl-CoA synthetases (AMP-forming) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCCGG AGGCAGAGGA GCTCGGAGGG ATAGGGAACC TGGTTGAGGC CCTGCACCGG 
AACGCCGTGG GGCGCGGGGG CAAGGGTGCC CTGCACCGCA AGGTCGGGGG GCGGTGGGAG
GCCGTCTCCT ACGGGGAGCT CTACGGGATG GTGCGGGACT TTGCCGCCGG GCTGGCCGGG
CTCGGGGTCG GCCGGGGGGA CAGGGTCGGC CTCATCGCGC GCAACCGGGT CGAGTGGGCG
GTGACCGACT TCGCGGTGCA GAGCCTCGGG GCGGCGACGG TGCCGGTCTA CCCGACGCTG
GAGCCGGAGC AGATGGCGCA CATCCTCGCC GACTGCGAGG CCCGGGTGGT CGTGGTCGAG
GACGGGGAGC TGCTGGGGCG GGTCTCCTCG GCGAGGGGGG AGCTTCCGGC GCTGGAGCAC
GTGGTCGTGA TGGAGGGGGA GGGGGCCACC CTCTTTGAGG AGGTGCTGCG GGAGGGGCGG
GAGCGGCCCC TCGAGGGCTG GGAGGAGGGC TGGCGCTCGC TCGGCCGGGA GGACGTGGCG
ACGATCATCT ACACCTCCGG GACGACCGGG AGGCCCAAGG GGGCCGTCCT CACCCACGGC
AACATCCTCT CCAACCTGGA GGGCATCCAG GACGCGCTCA CCGTCTACCC GGAGGACGTC
TTTCTCTCCT TTCTGCCGCT CTCGCACGTC TTCGAGCGCA CCTGCGGGCA GTTTCTCGCG
CTCGGCGTCG GGGCGAGCGT CTACTACGCC GAGTCGGTGG AGAAGGTGCC GGAGAACCTG
CGCGAGGTGC GGCCCACCGT CATGCCCAGC GTGCCCCGGC TCTACGAGAA GATGCACGAC
CGGGTGCGGG CCATGGTCGC CGGGGGTTCG CCGGTCAAGC GCTGGCTCTT CGGGCGGGCG
GTGGCGGCCG GGAGGCGGCG CTACGAGGTT CTGGACCGGG GGGGCCGGCC GGGCCTGCCG
CTGCGGGCCG CGCTCGCCGT CTACGACCGG CTCGTCTTCC GGCGGCTCAG GGAGGCCGTG
GGCGGGAGGG TGCGCTTCTT CGTCTCCGGC GGGGCCAAGC TGGACACCGA GGTGGGGAAG
TTCTTCTACG CGGCCGGGAT AAAGATCATG GAGGGCTACG GGCTCACCGA GACCTCGCCC
GTCATCGCCT GCAACCGGCT CGAGAAGCCG CGCTTCGGGA CCGTTGGGTT GCCGCTCTCC
AATTTGGAGG TCAGGATCTC CCCGGAGGGG GAGATCCAGG TGCGGGGGCC GAGCGTCATG
CGGGGGTACT TCCGGGACGA GCGGTCCACC GAGGAGGCCT TCACGCAGGA CGGCTTCTTC
CGCACCGGGG ACATCGGCTC CTTCGACGAG GACGGCTACC TCACCGTGAC CGACCGGCTC
AAGAGCCTCA TCGTGCTCAG CACCGGCAAG AACGTCGCCC CCCAGCCCAT CGAGTCCGCG
CTGGTCACGG CCCCCCACAT CTCGCAGGCC GTGGTCGTCG GCGAGGGGCG CAAGTACGTC
TCGGCCCTCG TGGTCCCCGA CTACCGGGCC GTGCGGGCGA CCCTCGGTGT GGGGGGGACC
GACGAGGAGC TCGCCGGGGA CGGGCGCGTG CAGCGGCTCA TCGAGCGCGA GGTCGAGGAG
GCCACGCGGG GGTTCGCCGA CTACGAGCGG CCCAAGAAGG TCGCCCTGCT GCCGCGCGAG
CTCTCGCAGG AGGCGGGGGA GCTCACCCCG ACCCTCAAGG TCAAGACCCG GGTCGTGCAG
CGGCGCTACG GGGGTTACAT AGAGAGGCTC TATGCGTGA
 
Protein sequence
MRPEAEELGG IGNLVEALHR NAVGRGGKGA LHRKVGGRWE AVSYGELYGM VRDFAAGLAG 
LGVGRGDRVG LIARNRVEWA VTDFAVQSLG AATVPVYPTL EPEQMAHILA DCEARVVVVE
DGELLGRVSS ARGELPALEH VVVMEGEGAT LFEEVLREGR ERPLEGWEEG WRSLGREDVA
TIIYTSGTTG RPKGAVLTHG NILSNLEGIQ DALTVYPEDV FLSFLPLSHV FERTCGQFLA
LGVGASVYYA ESVEKVPENL REVRPTVMPS VPRLYEKMHD RVRAMVAGGS PVKRWLFGRA
VAAGRRRYEV LDRGGRPGLP LRAALAVYDR LVFRRLREAV GGRVRFFVSG GAKLDTEVGK
FFYAAGIKIM EGYGLTETSP VIACNRLEKP RFGTVGLPLS NLEVRISPEG EIQVRGPSVM
RGYFRDERST EEAFTQDGFF RTGDIGSFDE DGYLTVTDRL KSLIVLSTGK NVAPQPIESA
LVTAPHISQA VVVGEGRKYV SALVVPDYRA VRATLGVGGT DEELAGDGRV QRLIEREVEE
ATRGFADYER PKKVALLPRE LSQEAGELTP TLKVKTRVVQ RRYGGYIERL YA