| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2057 |
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| Symbol | |
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| ID | 4115769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2085128 |
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| End bp | 2087500 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638036844 |
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| Product | 3-hydroxyacyl-CoA dehydrogenase |
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| Protein accession | YP_644814 |
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| Protein GI | 108804877 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAGGA TACGCAAGGT CGCCGTTCTG GGAGCCGGCA CCATGGGCGC CGCGATAGCC
GCCCACTGCG CCAACGCCGG GCTCGAGGTG GAGCTCTTGG ACATCGCTCC GGGAGAGGGG
GAGGACAAGA ACGCCGTCGT CAGGGCCGGC TTCGAGCGGA TGCGGCAGGC CCGCCCCCCG
GCGCTCATGA GCCAGCGGGT CGTCGAGAGG ATCCGGCTCG GCAACTTCGA GGAGCACTTC
GGGCGCGTGG CCGACGCCGA CTGGGTCGTG GAGGCCATCG TGGAGCGGCT CGAGCCCAAG
CGGGAGCTCA TGGCCCGGGT GGAGGAGACG GCGCGGGAGG ACGCCGTCGT CTCCTCGAAC
ACCTCCGGCA TCCCGCTGCG CAGCATCGCC GAGGGGCGCG GCGAGGGCTT CCGGCGCCGC
TTTCTCGGGA CCCACTTCTT CAACCCGCCG CGCTACCTCA AGCTGCTCGA GCTGATCCCC
ACCGGGGACA CCGACCCCGA GGTCGTCCGG CGGATGCGGG ACTTCGGCGA GCGGGTGCTG
GGCAAGGGGG CCGTCATCGC CAAGGACACC CCCAACTTCA TCGGCAACCG GCTCGGGAGC
TTCGCCGGGA TGCAGTCGGT GAGCTACGCC CTGGAGAACG GGTACGGGAT CGAGGAGGTC
GACGCCATAA CCGGCCCCCT CATCGGGCAC CCCAAGACCG CGACCTTCCG GCTCAACGAC
ACCGTGGGGC TGGACATAGC AGTCGGCGTG GCCGAGAACC TCTACGAGCT GGTCCCCGAG
GACGAGTCGC GCGAGGTCTT CAGGCCCCAC CCCAAGCTGA AGGAGATGAT CCGGCGCAAC
CTCCTCGGCA ACAAGACCGG CGCCGGCTTC TACAAGCGGG TGCGGGAGGA CGGGAAGACC
GCCTTCTACG TGCTGGACCT CGAGACCTTC GAGCACCGGC CGCCGGAGAA CCCGGAGGTC
CCCATCGCCG AGGAGGCCCG CAGGCAGGGC GACCTCGCCT CCCGGCTGCG CTTTCTCGTG
AGCAAGGCCG GCGAGGACCG GCACGCCCGC TACATCCGGG ACACCCTGCT CCCCTACCTG
GCCTACGCCT CCCGGCGGGT GCCGGAGATC TCCGACACCT TGGAGGACGT GGACCACGCG
ATGGAGTGGG GCTTCGGGCA CGAGGCCGGG CCCTTCAGGA CGTGGGACAT GCTCGGCGTC
GCCGAGACGG CGGAGCTGAT GCGCTCCATG GGCCTGGAGG TCGCCCCCTG GGTCGCCGAG
ATGCTCGAGG CCGGCAACGC GAGCTTCTAC CGGCGGGAGG GCGGCCGGGA GCTCGCCTAC
AGCCCGCTGC GCAAGGAGTA CGTGCCGGTG CGGGAGGACC CGCTGGCCAT CTCGCTGGAC
CGGCTGCGCG AGCAGGGCAG GGAGCTGGCC CGCAACGACT CCGCGAGCCT CCTCGACCTC
GGCGACGGGG TGCTCTGCCT GGAGTTCCAC TCCAGGGGCA ACTCCATAGA CCGGGGCGTG
ATAGAGATGG GCTTCCGGGC GCTGCGGGAG CTGGAGCGCG AGGAGGTCGT CGGGCTCGTC
GTCGGCAACG AGGGGCGCAA CTTCTGCGTG GGGGCGAACC TCGGCGAGAT CGCCCGGGCC
GTCCAGAACG GGGGGGCCGG GCAGGTGGGC GAGAGCGTGG ACGCCCTGCA CCGGCTGCTC
ATGGGCTTCC GCTTCTCCGA CAAGCCGGTC GTCGCCGCCC CGCGCGGCCA GACCCTCGGC
GGGGGGCTGG AGATCTGCCT GCACGCCTCC CGGGTCGTCG CCGCGGCCGA GAGCTACATG
GGGCTGGTGG AGGCCGGGGT GGGGCTCATC CCGGCCGGCG GCGGGACGAA GGAGATGGTG
CGGCGGACCG TCTCGCGGGC GCTGCGCGAG GCCCCCAACA GCCCTCCGCT GCCCTTTCTG
CAGAAGGCCT TCGAGACCAT CGCCACCGCC CGCGTCTCCG GGAGCGCGCT CGAGGCGCGG
GAGCTGGGCT TTCTGGACGA GGACGACCCG GTGGTGATGA ACGCCGACCA CCTCCTCCAC
CACGCCAAGG ACGAGGTGCT GGACCTCGCC GACAGCCACA CCCCCCCGGA GGGGGGCAAC
GACGTCTACG CCGCGGGCGT CCAGGCGCGG GCGGCGCTGC TCGTGGCGGT CCGGAGCATG
CAGTGGGGCC GCTACGCCAC CGAGTACGAC GGCGTCATCG CCGGGCACCT CGCCCGGGTG
ATGACCGGCG GGGATCTCAC CATGCCGCAG TGGGTGCCCG AGGAGCACAT CCTCCGGCTG
GAGAAGGAGG CCTTCCTCTC GCTTCTGGGC AACCGGAAGA CCCACGAGCG CATAGAGGCC
ATGCTCAAGA CCGGCAAGCC CTTGAGGAAC TAG
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| Protein sequence | MRRIRKVAVL GAGTMGAAIA AHCANAGLEV ELLDIAPGEG EDKNAVVRAG FERMRQARPP
ALMSQRVVER IRLGNFEEHF GRVADADWVV EAIVERLEPK RELMARVEET AREDAVVSSN
TSGIPLRSIA EGRGEGFRRR FLGTHFFNPP RYLKLLELIP TGDTDPEVVR RMRDFGERVL
GKGAVIAKDT PNFIGNRLGS FAGMQSVSYA LENGYGIEEV DAITGPLIGH PKTATFRLND
TVGLDIAVGV AENLYELVPE DESREVFRPH PKLKEMIRRN LLGNKTGAGF YKRVREDGKT
AFYVLDLETF EHRPPENPEV PIAEEARRQG DLASRLRFLV SKAGEDRHAR YIRDTLLPYL
AYASRRVPEI SDTLEDVDHA MEWGFGHEAG PFRTWDMLGV AETAELMRSM GLEVAPWVAE
MLEAGNASFY RREGGRELAY SPLRKEYVPV REDPLAISLD RLREQGRELA RNDSASLLDL
GDGVLCLEFH SRGNSIDRGV IEMGFRALRE LEREEVVGLV VGNEGRNFCV GANLGEIARA
VQNGGAGQVG ESVDALHRLL MGFRFSDKPV VAAPRGQTLG GGLEICLHAS RVVAAAESYM
GLVEAGVGLI PAGGGTKEMV RRTVSRALRE APNSPPLPFL QKAFETIATA RVSGSALEAR
ELGFLDEDDP VVMNADHLLH HAKDEVLDLA DSHTPPEGGN DVYAAGVQAR AALLVAVRSM
QWGRYATEYD GVIAGHLARV MTGGDLTMPQ WVPEEHILRL EKEAFLSLLG NRKTHERIEA
MLKTGKPLRN
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