| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_2048 |
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| Symbol | |
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| ID | 4115760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2073927 |
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| End bp | 2075579 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638036835 |
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| Product | SSS family solute/sodium (Na+) symporter |
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| Protein accession | YP_644805 |
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| Protein GI | 108804868 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0591] Na+/proline symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGGGC CGGCCCTGTT GCAGCTGAAG GTCTCCGTGG ACGAGTCCTG GGTGGACTAC
CTGATCATCG GGATCTACTT TCTCTTCGTG CTCGGCATCG GGGCGCTTTT GAGGGACAAG
ATGAGGACCT CCGAGGACTA CTTCCTCTCC GGCCGTTCGC TGCCGAGCTG GGTGACGGGG
CTGGCCTTCC TCGGGGCGAA CCTGGGGGCG CTGGAGATCC TGGGGATGGG GGCGGGGGCC
GCGCAGTACG GGCTCATGCA GGCGCACTTC TACTGGATCG GGGCGATCCC CGCGATGGTC
TTCGTGGCGC TGTTCATGAT CCCGTTCTAC TACGGTAGCC GGGTGCACTC GGTGCCCGGC
TACCTCAAGC TCCGCTACAA CGAGGCCACG CGCGGCTTCA ACGCCGTCCT GTTCGCCATC
TTCATGATCC TGCTCTCCGG CATAAACATG TACGCGATGG CGATCGTCTT CAAGCTGCTT
CTTGGGTGGT CGCTGACGGC GAGCATCCTG CTCTCGGCGG CGATCACGAT GGCGTACATC
CTCCTGGGCG GGCTCTCCTC CTCCATCTAC AACGAGGTGC TTCAGTTCTT CCTGATCACG
CTCGGCCTGG TGCCGCTGGT GGTCTTCGCC CTGATAGACG TGGGCGGCTG GGCGGGGCTG
CAGGAGGCGG TGGACCGGGA GGGCTACTTC CACCTGTGGG CTCACACCGG CACCACGGAC
AACCCGATGG CGGTGAGGTG GTTCGGGATC GTGCTGGGCC TGGGGTTCGT GCTCTCCTTC
GGCTACTGGT GCACGGACTT TCTGGTGGTC CAGCGCGCCC TGGCCGCCGA GGACGCCGCC
GCCGCGCAGC GCACCCCCCT GATCGCGGCC TTCCCCAAGC TCCTCTATGG CATCCTGGCG
ATCTTCCCGG GCCTCGTCGC GCTGACGATC GTCCCGAACC TGGGGCAGGG CGGGGGCGGC
CTGGCGAACT CGTACAACAT GGCGATCCCG TACGCGATGG CCCACTACTT CCCGAGCGGC
ATGCTGGGGC TGGGGCTCAC GGCCCTGCTC GCGGCCTTCA TGAGCGGGAT GGCGGGCAAC
GTCACGGCCT TCAACACGGT CTGGACCTAC GACATCTACC GCTCCTACAT CCGGCGCGAC
GCCCCCGACC GCCACTACCT GAACATGGGG CGCATCGCCA CCGTCGCCGG GGTCGTCCTG
AGCGTGGGGA CGGCCTACAT CGTGCTGGGC TTCGCGAGCA TCATGGACTA CGTGCAGCTG
TTGCACGGCC TGTTCCTGGC CCCGCTGTTC GGCACGTTCC TCCTGGGCAT GTTCTGGAAG
CGCACGACCC CTTGGGGCGG GTTCGCGGGC CTCGTCTCGG GGACGGCGGC GGGGCTGGTG
CTCTACGGGC TGGAGCTGCT GGGGACCATC CAGTACGGCG CTCCGATGGC GGGCAACTTC
TGGCGCGCCT GGTGGGCCTG GCTCGTCTGC TTCGTCGTTA CGATAGCCGT CTCGCTGGTG
ACGAGGCCCA AGGAGGAGCG CGAGCTGCGG GGCCTGGTCT ACGGCCTGAC GGAGAAGAAG
GAGGGCGTGG AGCAGGCCTG GTATAAGAAG CCGGGGGTCC TGGCCGCCGC GGTGCTGCTC
ATCACGCTCG TGCTGAACGT CATCTTCTTC TAG
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| Protein sequence | MSGPALLQLK VSVDESWVDY LIIGIYFLFV LGIGALLRDK MRTSEDYFLS GRSLPSWVTG
LAFLGANLGA LEILGMGAGA AQYGLMQAHF YWIGAIPAMV FVALFMIPFY YGSRVHSVPG
YLKLRYNEAT RGFNAVLFAI FMILLSGINM YAMAIVFKLL LGWSLTASIL LSAAITMAYI
LLGGLSSSIY NEVLQFFLIT LGLVPLVVFA LIDVGGWAGL QEAVDREGYF HLWAHTGTTD
NPMAVRWFGI VLGLGFVLSF GYWCTDFLVV QRALAAEDAA AAQRTPLIAA FPKLLYGILA
IFPGLVALTI VPNLGQGGGG LANSYNMAIP YAMAHYFPSG MLGLGLTALL AAFMSGMAGN
VTAFNTVWTY DIYRSYIRRD APDRHYLNMG RIATVAGVVL SVGTAYIVLG FASIMDYVQL
LHGLFLAPLF GTFLLGMFWK RTTPWGGFAG LVSGTAAGLV LYGLELLGTI QYGAPMAGNF
WRAWWAWLVC FVVTIAVSLV TRPKEERELR GLVYGLTEKK EGVEQAWYKK PGVLAAAVLL
ITLVLNVIFF
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