Gene Rxyl_2041 details

Gene Information

• Locus tag: Rxyl_2041
• ID: 4115851
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: -
• Start bp: 2066496
• End bp: 2069882
• Gene Length: 3387 bp
• Protein Length: 1128 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 638036828
• Product: pyruvate carboxylase
• Protein accession: YP_644798
• Protein GI: 108804861
• COG category: [C] Energy production and conversion
• COG ID: [COG1038] Pyruvate carboxylase
• TIGRFAM ID: [TIGR01235] pyruvate carboxylase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTGCGGA AGGTGCTTGT GGCCAACCGG GGGGAGATCG CCATCCGGGC CTTCAGGGCG 
GCCTACGAGC TGGGTATCCG GACGGTCGCG GTCTACACCC CCGACGACCG GGCCTCAATG 
CACCGCCAGA AGGCCGACGA GGCCTACGAG ATAGGCGAGC CGGGGCACCC GGTGCGGGCC 
TATCTGGACA TCGGGGCGCT GGTCGGCACC GCCGCGCGGG TGGGGGCGGA CGCCATCTAC 
CCCGGCTACG GCTTTCTCTC GGAGAGCGCA AAGTTCGCCG CCGCCTGCGA GGAGGCCGGG 
ATAACCTTCG TGGGGCCGCC GCCGGAGGTG CTCTCGCTCA CCGGGGACAA GGTGCGCGCC 
CGGGAGGCCG CCCGCGAGGC CGGGGTGCCG GTGCTGCGGG CCTCGGGGCC CGTGGCGACC 
GCCGAGGAGG CGCTCGCCGC CGCCGAGGAG GTGGGCTATC CGGTCTTCGT GAAGGCCGCC 
GGGGGCGGGG GCGGGAGGGG GCTCAGGATG GTCCGCCGGG CGCGGGATCT CCCGGGGGCG 
GTGCAGACCG CCATGCGGGA GGCCCAGGCG GCCTTCGGGA ACCCCACCGT GTTTCTGGAG 
CAGGCGCTGG AGCACCCGCG GCACATAGAG GTGCAGATCC TCGGGGACGC TGGCGGGGAG 
GTCATCCACC TCTTCGAGCG CGACTGCTCG GTGCAGCGGC GCCACCAGAA GGTGCTGGAG 
ATGGCCCCTG CCCCCAACCT GGACCCGCAG CTGCGCGAGA GGCTGTGCGA GGACGCGGTG 
CGCTTCGGGC GGGCGGTGGG CTACCGCAAT GCGGGGACGG TGGAGTTTCT GGTGGGCGAG 
GACGGCTCCC ACGTCTTCAT CGAGATGAAC CCCAGGATCC AGGTCGAGCA CACCGTCACC 
GAGGAGACCA CCGACGTGGA CATCGTCCAC GCCCAGCTGA GGATCGCCGG GGGCGAGACG 
CTCGCCGACC TGGGGCTGCG CCAGGAGGAG ATCCGCCAGC GGGGGGTCGC CCTGCAGTGC 
CGGGTGACCA CCGAGGACCC CGCCCAGGGC TTCCGGCCGG ACACGGGCAG GATCTCGGTC 
TACCGCTCGC CGGGCGGGGC GGGCATCCGG CTCGACGGCG GCAACTCCTT CGCCGGGGCG 
GAGGTCACCC CGTACTTCGA CTCCCTCCTG GTGAAGCTCA CCACCCGCGG CCCGGACCTC 
GCCGCCGCGG CCCGTAGGGC CAGGAGGGCG CTGGCGGAGT TCAGGGTGCG GGGGGTGGCC 
ACCAACATCG CCTTTCTGCG GGCCGTCCTC GACGACCCGG ACTTTCTGGC CGGCAGGATA 
GACACCTCGT TCATAGACCG GCGGCCGCAC CTCACGGCCG TGGGCACCGG CAGGGACCGG 
GCGAGCCGCC TGCTCTCGCT GCTGGCCGAC GTCACGGTGA ACCGGCCCCA CGGTCCGCCG 
CCCGACCTCC CGGACCCCCG GGGGAAGCTC CCCCCGCTGC CTTCCGCGGA CCCCCCCGCC 
GGCAGCAGGC AGCGCCTGCG GGAGCTCGGG CCCGAGGGCT TCGCCCGCTG GATGCGGGAG 
GAGCGGCGGG TGCTCGTCAC CGACACCACC CTGCGGGACG CCCACCAGTC GCTTCTGGCC 
ACCCGGATGC GCACCTTCGA CATGCTCGCC GCCGCGCCCC ACATCGCCCG GAGGCTGCCC 
GCGCTCCTCT CCGCCGAGGT GTGGGGCGGG GCCACCTTCG ACGTGGCGCT GCGCTTTCTG 
CACGAGGACC CCTGGGAGCG GCTGGCCCGC CTGCGGGAGG CGATGCCCAA CGTCTGCCTG 
CAGATGCTGC TGCGCGGTCA GAACGTCGTG GGCTACACCC GCTACCCGCC GGAGGTGGTC 
CGGGCCTTCG TGGAGGAGGC CCGCAGCACC GGCATAGACA TCTTCCGCAT CTTCGACGCC 
AACAACGACG TCGAGCAGAT GCGCGGGGCC ATAGAGGCCG CGGCGGAGGC CGGGGCGCTC 
GCCGAGGGCT GCCTGTGCTA CACCGCAGAC CTCTCCGACC CGGACGAGCC CCTCTACACC 
CTGGACTACT ACCTGAGGCT GGCCGAGGGG CTCGTGGAGG CCGGCTGCCA CGTGCTGTGC 
ATAAAGGACA TGGCCGGCCT TTTGCGGGCC CCGGCCGCCC GCGCGCTCGT CGGGGCGCTG 
CGGGAGCGCT TCGACCTGCC GGTGCACCTG CACACCCACG ACACCTCCGG GGGGCAGCTC 
GCCACCTACC TCGCCGCCAT CGAGGCCGGG GTGGACGCCG TGGACGGGGC GGCGGCCCCG 
CTCTCCGGGA TGACCAGCCA GCCCAGCCTC TCCGCCATCG TGGCCGCCAC CGAGCACACC 
GCGCGCGCCA CCGGGCTCTC CCTCGACGCC CTGGGAGACA TGGAGCCCTA CTGGGAGGCG 
GTGCGCAGCC TGTACGCCCC CTTCGAGGCG GGGCTGCGCT CGCCCACCGG CACCGTCTAC 
AGGCACGAGA TCCCCGGCGG CCAGCTCTCC AACCTGCGCC AGCAGGCGAT CTCGCTGGGC 
CTCGGCGACC GCTTCGAGGA GGTCGAGGAG TACTACGCCC GCTGCGACCG GCTGCTCGGG 
CGCCTGGTGA AGGTAACCCC CACCAGCAAG GTGGTGGGGG ATCTCGCGCT CTACCTGCTC 
TCGGCGGGCG TGGACCCGGA GGAGTTCGCG CGGGACCCGG GCTCCTACGA CCTGCCGGAG 
AGCGTGATCG GCTTTCTGCG CGGGGACCTC GGCGACCCCC CGGGCGGCTG GCCCGAGCCC 
CTCCGGACGC GGGCCCTCTC CGGGCGCTCC CTCCCTAAGG AGGACGGGGC GCTCTCTGGG 
GAGGATCTCA AGGCCCTCTC TGCGGAGGAG GGCCGCCGGG AGGCGCTCAA CCGGCTCATG 
CTGCCCGGCC CGGCCCGCGA GCAGAAACAG GCCGAGGAGC GCTACGGGGA CGTCTCCGTC 
ATCCCCAGCC GGGCCTTTCT CTACGGGCTC GAGACCGGGG AGGAGCTCGC CGTGGACCTC 
GAGCCCGGCG TCAGGCTCTA CGTGCGGCTC GAGGCCATCA CCGAGCCCGA CGAGCAGGGC 
ATACGCACCC TCATGATGAC CCTCAACGGC CAGCCGCGCC CGGTGGACGC CCGCGACCGC 
TCGCTGGCGC CGGAGGCCCC GGCCCGCGAG AAGGCCGACC CCTCGGAGCC CGGGCACGTC 
GCCGCCCCGA TGAGCGGGGT GGTGAGCCTG GCGGTGCGGG AGGGCCAGGC GGTCGAGGAG 
GGCGAGGAGA TCGGGAGCAT AGAGGCGATG AAGATGGAGT CCGCCATCCG CTCCCCGCTC 
TCCGGCACGG TGCGGCGCAT CGCCGTGCTC CCCGGGACCA ACGTGGAGCC GGGGGACCTC 
CTCGTGGTGA TCTCCGGTGG GGGGTGA 

 

Protein sequence

MLRKVLVANR GEIAIRAFRA AYELGIRTVA VYTPDDRASM HRQKADEAYE IGEPGHPVRA 
YLDIGALVGT AARVGADAIY PGYGFLSESA KFAAACEEAG ITFVGPPPEV LSLTGDKVRA 
REAAREAGVP VLRASGPVAT AEEALAAAEE VGYPVFVKAA GGGGGRGLRM VRRARDLPGA 
VQTAMREAQA AFGNPTVFLE QALEHPRHIE VQILGDAGGE VIHLFERDCS VQRRHQKVLE 
MAPAPNLDPQ LRERLCEDAV RFGRAVGYRN AGTVEFLVGE DGSHVFIEMN PRIQVEHTVT 
EETTDVDIVH AQLRIAGGET LADLGLRQEE IRQRGVALQC RVTTEDPAQG FRPDTGRISV 
YRSPGGAGIR LDGGNSFAGA EVTPYFDSLL VKLTTRGPDL AAAARRARRA LAEFRVRGVA 
TNIAFLRAVL DDPDFLAGRI DTSFIDRRPH LTAVGTGRDR ASRLLSLLAD VTVNRPHGPP 
PDLPDPRGKL PPLPSADPPA GSRQRLRELG PEGFARWMRE ERRVLVTDTT LRDAHQSLLA 
TRMRTFDMLA AAPHIARRLP ALLSAEVWGG ATFDVALRFL HEDPWERLAR LREAMPNVCL 
QMLLRGQNVV GYTRYPPEVV RAFVEEARST GIDIFRIFDA NNDVEQMRGA IEAAAEAGAL 
AEGCLCYTAD LSDPDEPLYT LDYYLRLAEG LVEAGCHVLC IKDMAGLLRA PAARALVGAL 
RERFDLPVHL HTHDTSGGQL ATYLAAIEAG VDAVDGAAAP LSGMTSQPSL SAIVAATEHT 
ARATGLSLDA LGDMEPYWEA VRSLYAPFEA GLRSPTGTVY RHEIPGGQLS NLRQQAISLG 
LGDRFEEVEE YYARCDRLLG RLVKVTPTSK VVGDLALYLL SAGVDPEEFA RDPGSYDLPE 
SVIGFLRGDL GDPPGGWPEP LRTRALSGRS LPKEDGALSG EDLKALSAEE GRREALNRLM 
LPGPAREQKQ AEERYGDVSV IPSRAFLYGL ETGEELAVDL EPGVRLYVRL EAITEPDEQG 
IRTLMMTLNG QPRPVDARDR SLAPEAPARE KADPSEPGHV AAPMSGVVSL AVREGQAVEE 
GEEIGSIEAM KMESAIRSPL SGTVRRIAVL PGTNVEPGDL LVVISGGG