Gene Rxyl_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2024 
Symbol 
ID4115914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2049579 
End bp2050814 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content68% 
IMG OID638036812 
ProductSSU ribosomal protein S1P 
Protein accessionYP_644783 
Protein GI108804846 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0539] Ribosomal protein S1 
TIGRFAM ID[TIGR00717] ribosomal protein S1 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAA CTTCAAATAG GGTCTCACAC GAGCAGAGCA TGAGGGACTT CTTCCGCGAG 
GAGAACGGGG AGATAGTCCC GGTGGACGAG AGCGTCCTGA TCGACTTTCA GGACGGCGAC
ATCGTCGAGG GCGAGGTCGT CCGGATAGAC AAGGACGAGG TCCTCGTCGA CATAGGGTAC
AAGTCTGAGG GTCTGATCCC GGCGAACGAG CTGACCATCC GCAAGGGGGC GGACCCGAAG
GACGTGGTGG AGCTGGGCCA GCGGATAGAG GCGCTGGTTC TCCAGAAGGA GGACGCCGAC
GGCCGCCTCA TCCTCTCGGC CAAGCGGGCC GCCTTCGAGC GGGCCTGGAA CAAGATAGAG
GAGGCCTACC GGGAGCAGCG CAACGTCGAG GGCCCGGTCA TCGAGGTGGT CAAGGGCGGC
CTCATACTGG ACATCGGCCT GCGGGGCTTT CTGCCCGCCA GCCTCGTGGA CATCCGGCGG
GTGAGGAACC TCGAGGAGTA CCTGGGGCGG CGGCTGGAGT GCAAGGTCAT AGAGCTGAAC
CGCAGCCGCA ACAACGTGGT GCTCTCCCGG CGGGCGGTGC TCGAGGAGGA GCGCAAGGAG
GAGCGCGAGC GGATCCTCAA CTCCCTCAAC GAGGGGGACA TCGTCAAGGG CACCGTCTCG
AACCTGGTGG ACTTCGGCGC CTTCGTCGAC CTGGACGGGA TAGACGGCCT GATCCACATC
TCCGAGCTCT CCTGGAACCA CGTCGACCAC CCGAGCGAGG TGGTCCAGGT CGGCGAGGAG
GTCGAGGTGA AGGTGCTGGA GGTGGACCGC GAGCGGGAGC GGATCTCGCT CGGCCTCAAG
CAGACCCGCA AGGACCCCTG GCAGGAGGTC GTAGAGCGGG TCAACGTGGG CGACGTCATC
CACGGCCGGG TGACCAAGCT GGTCTCCTTC GGGGCCTTCG TGGAGGTCGC CGAGGGGGTG
GAGGGTCTGA TCCACATCTC CGAGCTGGCC GAGCACCACG TCGAGACCCC GGACGAGATC
GTGCGCAGCG GCGACGAGGT GGACGCCCGG GTCATAGACG TGGACCCGCG GCGCCGCCGG
CTCTCCCTCT CGCTGCGCCC GAAGCGCGAG GAGCGCGAGG AGCGGCGGCG CGAGGAGCGG
CGGCGCGAGG AGCGCGAGGA GCGGCGGCCG CGCGAGAGCG GCCTGCGCAC CGGCGCCTTC
GACGCCCTGA AGGACCTGGA CCTCGAGGAG CGATAG
 
Protein sequence
MTETSNRVSH EQSMRDFFRE ENGEIVPVDE SVLIDFQDGD IVEGEVVRID KDEVLVDIGY 
KSEGLIPANE LTIRKGADPK DVVELGQRIE ALVLQKEDAD GRLILSAKRA AFERAWNKIE
EAYREQRNVE GPVIEVVKGG LILDIGLRGF LPASLVDIRR VRNLEEYLGR RLECKVIELN
RSRNNVVLSR RAVLEEERKE ERERILNSLN EGDIVKGTVS NLVDFGAFVD LDGIDGLIHI
SELSWNHVDH PSEVVQVGEE VEVKVLEVDR ERERISLGLK QTRKDPWQEV VERVNVGDVI
HGRVTKLVSF GAFVEVAEGV EGLIHISELA EHHVETPDEI VRSGDEVDAR VIDVDPRRRR
LSLSLRPKRE EREERRREER RREEREERRP RESGLRTGAF DALKDLDLEE R