Gene Rxyl_2021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2021 
Symbol 
ID4115911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2046323 
End bp2048200 
Gene Length1878 bp 
Protein Length625 aa 
Translation table11 
GC content68% 
IMG OID638036809 
Productexcinuclease ABC subunit B 
Protein accessionYP_644780 
Protein GI108804843 
COG category[L] Replication, recombination and repair 
COG ID[COG0556] Helicase subunit of the DNA excision repair complex 
TIGRFAM ID[TIGR00631] excinuclease ABC, B subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.39565 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGGCT CGGGCAAGAC CCACACCATG GCGCGGGTCA TCGAGAAGGT CGGGAGGCCC 
GCGCTCGTCA TCGCGCACAA CAAGACGCTC GCCGCGCAGC TCGCCAGCGA GTTCTCCGAG
TTCTTCCCCA ACAACGCCGT CGAGTACTTC GTGAGCTACT ACGACTACTA CCAGCCCGAG
GCCTACGTCC CGCAGACGGA CACGTTCATC GAGAAGGACG CCCAGATCAA CGAGGACATA
GACCGCCTGA GGCACTCGGC CACCAGCGCG CTCTTCACCC GGCGCGACGT GATCGTGGTG
GCGAGCGTCT CGGCCATCTA CGGCCTGGGG AGCCCGGAGG AGTACCGGCA GAAGATGGTC
CTGCTGGAGA GGGGCGGCTT CTACGACCTC GACGACGTGC TGCGGGATCT GGTGCGCATC
CAGTACACCA GGAACGACTA CCAGCTCTCA CGCGGCAACT TCCGGGTGCG CGGCGACGTG
CTGGAGGTCC ACCCGGCCTA CCAGGACACC TTCTACCGCC TCTCCTTCTT CGGCGACGAG
CTGGAGGGCA TCATGGAGGT CGACCCGGTA ACCGGGGAGG TGCTGCGCGA GCCGGAGTCG
CTCACGGTCT ACCCCGCCAC CCACTTCGTC ACCGGCGAGG AGCGGCTGCG GCGGGCCATA
GAGGGCATCG AGGCGGAACT CGAGGAGCGC TACGCCGAGC TCGAGCGGGA GGGGAAGATG
CTCGAGGCCT ACCGCCTCAG GCAGCGGACC CAGTACGACC TGGAGATGCT GCGGGAGCTC
GGCTACTGCT CGGGGATAGA GAACTACTCG CGCCACCTCG ACGGCCGCCC GCCCGGCTCC
ACCCCCTACA CCCTGCTGGA TTACTTCCCC GAGGACTACG TCACCTTCGT GGACGAGTCG
CACATCACGC TGCCGCAGAT CCGGGGGATG TACAACGGGG ACCGCAGCCG CAAGGAGACG
CTGGTGGAGC ACGGCTTCCG GCTTCCCTCC GCGCTGGACA ACCGGCCCCT GAGGTGGGAG
GAGTTCCTGC TGAAGACCAA CCAGCTCGTC TTCGTCTCGG CCACGCCGGG CCCCTACGAG
CTCGAGAACA GCGAGCGGGT GGTCGAGCAG ATCATCCGCC CCACCGGGCT CGTGGACCCG
GAGGTGGAGG TCAGGCCGAC GAGAAACCAG ATCGACGACC TGATGAACGA GGTCCACCGG
CGCGTCGAGC GCAACGAGCG GGTGCTCATC ACCACGCTCA CCATAAAGAT GGCCGAGGAC
CTCACCGACT ACCTGCTGGA GCACGGGGTG AAGGCCCGCT ACATGCACGC CAACATCGAG
ACGCTGGACC GCATCCAGAT CATCCGGGGC CTCAGGACCG GCGAGTTCGA CGTGCTGGTG
GGGATAAACC TGCTGCGGGA GGGGCTGGAT TTGCCGGAGG TCTCGCTCGT GGCCATCCTG
GACGCGGACA AGGAGGGCTT TCTGCGCGGC GAGCGGGCGC TCATCCAGAC CATCGGGCGG
GCGGCGCGCA ACGCGAACGG GCGGGTGATC ATGTACGCCG ACACCGAGAC GGAGGCGATG
CGCGCGGCGA TCCGGGAGAC CAACCGCCGC CGCAGCATCC AGATGGAGTA CAACCGCCGC
CACGGCATCG AGCCGCGCAC GATCAGGAAG GGCGTCTCGG ACATCCTGCT CGCGGCCGAG
GCGAGGGGTC TGTACCGGGC GGGCCGGAGG CGGCGGGCGG CGGAGGCCCC GCGGGACCCG
GGGGAGCTGC GCGACCTGAT CGCCAGGCTG CAGGCGGAGA TGATGGAGGC CGCCGAGGAG
CTGAAGTTCG AGTACGCGGC GAAGCTGCGG GACGAGATAA AGGACCTCGA GCGCGAGCTG
CAGGAGGCTG CCTCCTAG
 
Protein sequence
MTGSGKTHTM ARVIEKVGRP ALVIAHNKTL AAQLASEFSE FFPNNAVEYF VSYYDYYQPE 
AYVPQTDTFI EKDAQINEDI DRLRHSATSA LFTRRDVIVV ASVSAIYGLG SPEEYRQKMV
LLERGGFYDL DDVLRDLVRI QYTRNDYQLS RGNFRVRGDV LEVHPAYQDT FYRLSFFGDE
LEGIMEVDPV TGEVLREPES LTVYPATHFV TGEERLRRAI EGIEAELEER YAELEREGKM
LEAYRLRQRT QYDLEMLREL GYCSGIENYS RHLDGRPPGS TPYTLLDYFP EDYVTFVDES
HITLPQIRGM YNGDRSRKET LVEHGFRLPS ALDNRPLRWE EFLLKTNQLV FVSATPGPYE
LENSERVVEQ IIRPTGLVDP EVEVRPTRNQ IDDLMNEVHR RVERNERVLI TTLTIKMAED
LTDYLLEHGV KARYMHANIE TLDRIQIIRG LRTGEFDVLV GINLLREGLD LPEVSLVAIL
DADKEGFLRG ERALIQTIGR AARNANGRVI MYADTETEAM RAAIRETNRR RSIQMEYNRR
HGIEPRTIRK GVSDILLAAE ARGLYRAGRR RRAAEAPRDP GELRDLIARL QAEMMEAAEE
LKFEYAAKLR DEIKDLEREL QEAAS