Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_2021 |
Symbol | |
ID | 4115911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2046323 |
End bp | 2048200 |
Gene Length | 1878 bp |
Protein Length | 625 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638036809 |
Product | excinuclease ABC subunit B |
Protein accession | YP_644780 |
Protein GI | 108804843 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.39565 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGGCT CGGGCAAGAC CCACACCATG GCGCGGGTCA TCGAGAAGGT CGGGAGGCCC GCGCTCGTCA TCGCGCACAA CAAGACGCTC GCCGCGCAGC TCGCCAGCGA GTTCTCCGAG TTCTTCCCCA ACAACGCCGT CGAGTACTTC GTGAGCTACT ACGACTACTA CCAGCCCGAG GCCTACGTCC CGCAGACGGA CACGTTCATC GAGAAGGACG CCCAGATCAA CGAGGACATA GACCGCCTGA GGCACTCGGC CACCAGCGCG CTCTTCACCC GGCGCGACGT GATCGTGGTG GCGAGCGTCT CGGCCATCTA CGGCCTGGGG AGCCCGGAGG AGTACCGGCA GAAGATGGTC CTGCTGGAGA GGGGCGGCTT CTACGACCTC GACGACGTGC TGCGGGATCT GGTGCGCATC CAGTACACCA GGAACGACTA CCAGCTCTCA CGCGGCAACT TCCGGGTGCG CGGCGACGTG CTGGAGGTCC ACCCGGCCTA CCAGGACACC TTCTACCGCC TCTCCTTCTT CGGCGACGAG CTGGAGGGCA TCATGGAGGT CGACCCGGTA ACCGGGGAGG TGCTGCGCGA GCCGGAGTCG CTCACGGTCT ACCCCGCCAC CCACTTCGTC ACCGGCGAGG AGCGGCTGCG GCGGGCCATA GAGGGCATCG AGGCGGAACT CGAGGAGCGC TACGCCGAGC TCGAGCGGGA GGGGAAGATG CTCGAGGCCT ACCGCCTCAG GCAGCGGACC CAGTACGACC TGGAGATGCT GCGGGAGCTC GGCTACTGCT CGGGGATAGA GAACTACTCG CGCCACCTCG ACGGCCGCCC GCCCGGCTCC ACCCCCTACA CCCTGCTGGA TTACTTCCCC GAGGACTACG TCACCTTCGT GGACGAGTCG CACATCACGC TGCCGCAGAT CCGGGGGATG TACAACGGGG ACCGCAGCCG CAAGGAGACG CTGGTGGAGC ACGGCTTCCG GCTTCCCTCC GCGCTGGACA ACCGGCCCCT GAGGTGGGAG GAGTTCCTGC TGAAGACCAA CCAGCTCGTC TTCGTCTCGG CCACGCCGGG CCCCTACGAG CTCGAGAACA GCGAGCGGGT GGTCGAGCAG ATCATCCGCC CCACCGGGCT CGTGGACCCG GAGGTGGAGG TCAGGCCGAC GAGAAACCAG ATCGACGACC TGATGAACGA GGTCCACCGG CGCGTCGAGC GCAACGAGCG GGTGCTCATC ACCACGCTCA CCATAAAGAT GGCCGAGGAC CTCACCGACT ACCTGCTGGA GCACGGGGTG AAGGCCCGCT ACATGCACGC CAACATCGAG ACGCTGGACC GCATCCAGAT CATCCGGGGC CTCAGGACCG GCGAGTTCGA CGTGCTGGTG GGGATAAACC TGCTGCGGGA GGGGCTGGAT TTGCCGGAGG TCTCGCTCGT GGCCATCCTG GACGCGGACA AGGAGGGCTT TCTGCGCGGC GAGCGGGCGC TCATCCAGAC CATCGGGCGG GCGGCGCGCA ACGCGAACGG GCGGGTGATC ATGTACGCCG ACACCGAGAC GGAGGCGATG CGCGCGGCGA TCCGGGAGAC CAACCGCCGC CGCAGCATCC AGATGGAGTA CAACCGCCGC CACGGCATCG AGCCGCGCAC GATCAGGAAG GGCGTCTCGG ACATCCTGCT CGCGGCCGAG GCGAGGGGTC TGTACCGGGC GGGCCGGAGG CGGCGGGCGG CGGAGGCCCC GCGGGACCCG GGGGAGCTGC GCGACCTGAT CGCCAGGCTG CAGGCGGAGA TGATGGAGGC CGCCGAGGAG CTGAAGTTCG AGTACGCGGC GAAGCTGCGG GACGAGATAA AGGACCTCGA GCGCGAGCTG CAGGAGGCTG CCTCCTAG
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Protein sequence | MTGSGKTHTM ARVIEKVGRP ALVIAHNKTL AAQLASEFSE FFPNNAVEYF VSYYDYYQPE AYVPQTDTFI EKDAQINEDI DRLRHSATSA LFTRRDVIVV ASVSAIYGLG SPEEYRQKMV LLERGGFYDL DDVLRDLVRI QYTRNDYQLS RGNFRVRGDV LEVHPAYQDT FYRLSFFGDE LEGIMEVDPV TGEVLREPES LTVYPATHFV TGEERLRRAI EGIEAELEER YAELEREGKM LEAYRLRQRT QYDLEMLREL GYCSGIENYS RHLDGRPPGS TPYTLLDYFP EDYVTFVDES HITLPQIRGM YNGDRSRKET LVEHGFRLPS ALDNRPLRWE EFLLKTNQLV FVSATPGPYE LENSERVVEQ IIRPTGLVDP EVEVRPTRNQ IDDLMNEVHR RVERNERVLI TTLTIKMAED LTDYLLEHGV KARYMHANIE TLDRIQIIRG LRTGEFDVLV GINLLREGLD LPEVSLVAIL DADKEGFLRG ERALIQTIGR AARNANGRVI MYADTETEAM RAAIRETNRR RSIQMEYNRR HGIEPRTIRK GVSDILLAAE ARGLYRAGRR RRAAEAPRDP GELRDLIARL QAEMMEAAEE LKFEYAAKLR DEIKDLEREL QEAAS
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