Gene Rxyl_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2007 
Symbol 
ID4115897 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2028599 
End bp2029564 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content75% 
IMG OID638036795 
Producthypothetical protein 
Protein accessionYP_644766 
Protein GI108804829 
COG category[S] Function unknown 
COG ID[COG0391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01826] conserved hypothetical protein, cofD-related 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.632663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCAGGG GCGGCGAGAA CCTACGGGTG GTGGCCTTCG GCGGCGGCAC CGGGCTCCCG 
GTGCTGCTGC GGGGCCTGAG GGACGCGGTC GGGGATCTGG TCGCGGTCGT CACCGTGGCC
GACGACGGGG GCTCCAGCGG CCGGCTGCGT CAGGAGCTGG GGGTCGCCCC GCCCGGCGAC
GTCCGCAACT GCCTGGTGGC CCTCGCCGGC CGGCGGCGGC TGGCGGAGGT CTTCAACTAC
CGGTTCGAGG CGGGGGAGGA GCTCAGGGAC CACGCGGTGG GCAACCTCAT CATCGCCGCG
CTCGCGGACA TGGCCGGGGG CTTCTGCGAG GGGGTGGAGC AAGCAGCCCG CTTTCTGCGG
GTGCGGGGCC GGGTCTACCC GGCCTCCACC GAGAGCCTGA CGCTCGTGGT CCGCTACGAG
GACGGTACGG TGGTGCGCGG CGAGTCGGTG GTGGGGAGGC TCGGCGGCCG GATAGAACGG
GTGGGGGTGG AGCCCCGCGG CGCCCCGGCT CCCCCGGCGG TGCTCGAGGC CATAGAGGGG
GCCGACGTGG TCGTCCTGAG CCCCGGGAGC CTTTTCACCA GCACCATCCC CTCGCTGCTG
GGCGGCGGGG TGCGAGAGGC GCTCGCCCGC TTCGGGGGGC CGGTGCTCTA CGCGGCGAAC
GTCATGACCC AGCCGGGGGA GACCTCCGGC TTTGGCGCGG CGGATCACGT CCGGGCGATC
TCGCGCCACG TGGGGCCGGT GGTCACCGAC GTGCTCGTCC ACCGGGGAAG GCTGCCCCGG
GCGGTGCTCG ACCGCTACGC GGCGAAGGGG GCGTTCCCGG TCGAGGTGGA CCGCGGGGAG
CTCGAGCGCG AGGGCGTCCG GGTGCGGGAG GCGGACCTGC TCTCCGGGCG CTGGGAGGCC
GGCATCCGGC ACGACCCGGA GAAGCTGGCC CGGGAGGTGT GCGAGGCTGC CCTCGTTCGC
CTCTGA
 
Protein sequence
MIRGGENLRV VAFGGGTGLP VLLRGLRDAV GDLVAVVTVA DDGGSSGRLR QELGVAPPGD 
VRNCLVALAG RRRLAEVFNY RFEAGEELRD HAVGNLIIAA LADMAGGFCE GVEQAARFLR
VRGRVYPAST ESLTLVVRYE DGTVVRGESV VGRLGGRIER VGVEPRGAPA PPAVLEAIEG
ADVVVLSPGS LFTSTIPSLL GGGVREALAR FGGPVLYAAN VMTQPGETSG FGAADHVRAI
SRHVGPVVTD VLVHRGRLPR AVLDRYAAKG AFPVEVDRGE LEREGVRVRE ADLLSGRWEA
GIRHDPEKLA REVCEAALVR L