Gene Rxyl_2006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_2006 
Symbol 
ID4117594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp2027743 
End bp2028423 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content77% 
IMG OID638036794 
Producthypothetical protein 
Protein accessionYP_644765 
Protein GI108804828 
COG category[S] Function unknown 
COG ID[COG1481] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.792156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCCATC TCGGGACCGT GGAGCCGGAC CGCTTCGGGC GCCTGCGCTA CTCGGTGCGG 
GCCGAGGGCG AGGCCGCGCT CCGGGCCGCA GGGGAGCTGC GCGCCGTGCG CGAGGCCCGG 
GGGGCCGCCG ACCTTGCGGG CTACCTGCGC GGCGCCTTCG CGGGGGCCGG GTCGGTGACC 
CGTCCCGGAG GGGCCGGGGG ACACCACCTG GAGTTCGTAC ACCCCGACGA GGAGTTCGTC 
CGGCGGGTGG CCCGCTTCTC CCGGGCCCCC CTCAGCGTGA CCCGCCGCCG GGGGCGCTGG 
GTGGCCTACA CCAAGAGCGC CGACGGGGTG ACCACCCTGC TCTCCCAGAT GGGGCTGCAC 
GACGCCGTGC TCGAGTACGA GGCCCGGGCG GTGCTCGGCG AGGCCAAGGC CAACGCCAAC 
CGCATCACCA ACTTCGACGC GGCCAACGCC GGGAGGACCG CCCGCGCCGC CGCCCGGCAG 
CAGGCCGCCC TCCGGCGGCT CGACCCGGAG GGGCTGCCGC CGGCGCTCAG GGAGATGCTC 
GAGCTCCGGC TCGAGCACCC CGACGCGCCG CTCGCCGAGC TCGCCCGTCT CGGCGGGATC 
TCCCGCAGCG CCGCGAACCA CCGGCTCCGG CGGCTCACCG CCCTCGGCGA GCGCGCCGCC 
CGTAGAGAGG ACCCCTGTTA A
 
Protein sequence
MAHLGTVEPD RFGRLRYSVR AEGEAALRAA GELRAVREAR GAADLAGYLR GAFAGAGSVT 
RPGGAGGHHL EFVHPDEEFV RRVARFSRAP LSVTRRRGRW VAYTKSADGV TTLLSQMGLH 
DAVLEYEARA VLGEAKANAN RITNFDAANA GRTARAAARQ QAALRRLDPE GLPPALREML 
ELRLEHPDAP LAELARLGGI SRSAANHRLR RLTALGERAA RREDPC