Gene Rxyl_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1998 
Symbol 
ID4117586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2018929 
End bp2020179 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content70% 
IMG OID638036785 
ProductS-adenosyl-L-homocysteine hydrolase 
Protein accessionYP_644757 
Protein GI108804820 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0499] S-adenosylhomocysteine hydrolase 
TIGRFAM ID[TIGR00936] adenosylhomocysteinase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.205607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGGG ACTCCATCAT AAAGGACCCT TCGCTGGCCC CCGAGGGGCA TCGGAAGATA 
GCGTGGGTGG CGCAGCACGC GCCGGTGCTG CGCGCGATAG CGCAGCGGCG GCTCTCCGAC
GGCTCGCTGC GGGGCCGCCG GGTGGCGATG GCCATCCACC TGGAGGCCAA GACCGCCTAC
CTGGCGATTC TGCTGCGCGA GGCGGGGGCG GAGGTGACCG TCTCGGGGAG CAACCCGCTC
TCCACCCAGG ACGCGGTGTG CGCGGCGCTC GCGGAGCGGG GGGTGCGGGT CTTCGCCACG
CACGACCCCT CCCCCGAGGA GTTCGAGGGG TACCTGATGC GCACCATAGA GACGGCGCCG
GAGATCGTCA TAGACGACGG GGCCGAGCTG GTGAGCCGGA TGGTGCTCCA CCGGCCGGAC
CTCCTGCAGA ACGTGGCGGG GGCCTCCGAG GAGACGACCA CCGGCGTCAT AAAGCTGCGC
GCCATGGACG AGGAGGGGGT GCTGCCCTTC CCGGTGCTGG CCGCCAACGA CGCCCGGATG
AAGCATCTCT TCGACAACCG CTACGGCACC GGCCACTCCT CCATAGCCAG CATCGTCTCC
AACACCAACC TCTTCCTCTC GGGGAAGGTG GTGGTGGTGA TGGGCTTCGG TTGGGTCGGT
CGGGGCCTGG CCCGCTATGC CGACGGGATG GGCGCCCGGG TGGTGGTGTG CGAGCCGGAC
CCGGTCAAGC TGATCGAGGC TTACGCCGAG GGCTACGAGG TGATGAACTC GCTGCGCGCC
GCCGAGGTGG GGGACGTGTT CGTGACCGGC ACGGGCAACC TGAAGGTGCT GCGGGCCGAG
CACTTCGAGC GGATGAAGGA CGGTGCGATC CTGGCGAACG CCGGCCACTA CGACCACGAG
TTCGACCTGG CGGCCCTGAG GGAGATGGCG GTGGCCGAGC GGGAGGCGCG GGCGAACATC
ACGGAGTACG AGCTTCCCGA CGGCCGCAGG CTGCACGTGC TGGCGCGGGG GCGGCTGGTG
AACATCGCCG CCGCCGACGG GCACCCGGTG GAGATCATGG ACCTCACCTT CGCCGTGCAG
GCGCTGGCGG CGCACCACCT GGCGAACCAC GCCGCGGAGA TGCGCCCGGG GCTGCAGCCG
ATCCCGCAGG AGATCGACGA GCTGGTCGCG CGCACCAAGC TGGACACGAT GGGCGTGGAG
CCGGAGAGGC TGACCGGGGA GCAGCTGGCG TACCTGAGGA GCTGGCGGTA G
 
Protein sequence
MIRDSIIKDP SLAPEGHRKI AWVAQHAPVL RAIAQRRLSD GSLRGRRVAM AIHLEAKTAY 
LAILLREAGA EVTVSGSNPL STQDAVCAAL AERGVRVFAT HDPSPEEFEG YLMRTIETAP
EIVIDDGAEL VSRMVLHRPD LLQNVAGASE ETTTGVIKLR AMDEEGVLPF PVLAANDARM
KHLFDNRYGT GHSSIASIVS NTNLFLSGKV VVVMGFGWVG RGLARYADGM GARVVVCEPD
PVKLIEAYAE GYEVMNSLRA AEVGDVFVTG TGNLKVLRAE HFERMKDGAI LANAGHYDHE
FDLAALREMA VAEREARANI TEYELPDGRR LHVLARGRLV NIAAADGHPV EIMDLTFAVQ
ALAAHHLANH AAEMRPGLQP IPQEIDELVA RTKLDTMGVE PERLTGEQLA YLRSWR