Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1992 |
Symbol | |
ID | 4117580 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 2012189 |
End bp | 2013469 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638036779 |
Product | ABC transporter related |
Protein accession | YP_644751 |
Protein GI | 108804814 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.394996 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCCGGAGG CGGGCGGCTC TGTCTCTTTT GGAGAGGAGG AGGTAGGAGA GATGGCTGAG GTAACGCTCG AGAACGTCAC CAAAGTCTAC GGAGAGGACG TAGTCGCGGT CAGGGACATG AACCTCGACA TCCCCGACGG GGAGTTCGTG GTCTTCGTCG GGCCCTCGGG GTGCGGCAAG AGCACGGCGC TGCGCATGAT CGCCGGGCTC GAGGACATCT CCAGCGGCAA GATCTTCATC GGCGACGAGC TCGTCAACGA CAAGCCGCCG CGCGAGCGCG ACATCGCCAT GGTCTTCCAG AACTACGCGC TATACCCGCA CATGAACGTC AGGGAGAACA TGGGCTTCGC GCTCAAGCTC CGGAAGATGC CCAAGGACGA GATAAACCGG CGGGTGGAGG AGGCGGCGCG CATCCTCGGC ATAGAGCGCT TTCTGGACCG CAAGCCCAAG GCGCTCTCCG GCGGCCAGCG GCAGCGGGTC GCGCTCGGGC GGGCCATCGT CCGGGAACCC AAGGCCTTCC TCATGGACGA GCCCCTCTCC AATCTGGACG CCAAGCTCAG GGTGCAGATG CGCACCGAGA TCGCCAAGCT GCACAACAGG ATCGGGACCA CCACCATCTA CGTCACCCAC GACCAGACCG AGGCCATGAC GATGGCCGAC AGGATCGTGG TCCTCAAGGA CGGGGTGGTG CAGCAGATAG CCCCGCCGCA GGAGATGTAC GACCACCCGG AGAACATCTT CGTGGCCGGG TTTATCGGCT CTCCGGCGAT GAACTTCATC ATGGCGCGCC TGGAGAGGGA GGACTCTGGC TTTGTGGCGA CCTTCGGCCG GACCCGGGTC CCCATCCACG AGGAGGCCGT ACGCTTCGCC AGGGAGCGCG GCAGGGAGCT GGAGGCCTAC GCCGGCAAGG AGGTCGTCCT GGGGATAAGG CCCGAGCACA TAGAGGACGC CCGGTTCGCC GAGGAGGCGG GCGCCCGGGA GAGCACCATA GAGGTCGAGC CGCAGGTCAT AGAGAGCATG GGCAGCGAGA AGTACGTCTA CTTCGACGTG CCCCGGGAGC AGCACGCCCA CACCCGGACC ATCGACGAGA TGGAGGCCGA GGTCGGCACC GGCGACGGGG GCGCCGAGTC GGAGGCCGCC GGCGGCGGGG AGAGCGGCGA GCTGATGGTG GCCAGGGTCT CGGCGGAGAG CGACGCCCGG GAGGGCCACA AGGTTCTGCT GGTCATCGAC TCCTCCAAGG TCCACCTCTT CGACCCGGAG ACCGAGAAGG CCATCCTGTA G
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Protein sequence | MPEAGGSVSF GEEEVGEMAE VTLENVTKVY GEDVVAVRDM NLDIPDGEFV VFVGPSGCGK STALRMIAGL EDISSGKIFI GDELVNDKPP RERDIAMVFQ NYALYPHMNV RENMGFALKL RKMPKDEINR RVEEAARILG IERFLDRKPK ALSGGQRQRV ALGRAIVREP KAFLMDEPLS NLDAKLRVQM RTEIAKLHNR IGTTTIYVTH DQTEAMTMAD RIVVLKDGVV QQIAPPQEMY DHPENIFVAG FIGSPAMNFI MARLEREDSG FVATFGRTRV PIHEEAVRFA RERGRELEAY AGKEVVLGIR PEHIEDARFA EEAGARESTI EVEPQVIESM GSEKYVYFDV PREQHAHTRT IDEMEAEVGT GDGGAESEAA GGGESGELMV ARVSAESDAR EGHKVLLVID SSKVHLFDPE TEKAIL
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