Gene Rxyl_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1992 
Symbol 
ID4117580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp2012189 
End bp2013469 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content66% 
IMG OID638036779 
ProductABC transporter related 
Protein accessionYP_644751 
Protein GI108804814 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3839] ABC-type sugar transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.394996 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCGGAGG CGGGCGGCTC TGTCTCTTTT GGAGAGGAGG AGGTAGGAGA GATGGCTGAG 
GTAACGCTCG AGAACGTCAC CAAAGTCTAC GGAGAGGACG TAGTCGCGGT CAGGGACATG
AACCTCGACA TCCCCGACGG GGAGTTCGTG GTCTTCGTCG GGCCCTCGGG GTGCGGCAAG
AGCACGGCGC TGCGCATGAT CGCCGGGCTC GAGGACATCT CCAGCGGCAA GATCTTCATC
GGCGACGAGC TCGTCAACGA CAAGCCGCCG CGCGAGCGCG ACATCGCCAT GGTCTTCCAG
AACTACGCGC TATACCCGCA CATGAACGTC AGGGAGAACA TGGGCTTCGC GCTCAAGCTC
CGGAAGATGC CCAAGGACGA GATAAACCGG CGGGTGGAGG AGGCGGCGCG CATCCTCGGC
ATAGAGCGCT TTCTGGACCG CAAGCCCAAG GCGCTCTCCG GCGGCCAGCG GCAGCGGGTC
GCGCTCGGGC GGGCCATCGT CCGGGAACCC AAGGCCTTCC TCATGGACGA GCCCCTCTCC
AATCTGGACG CCAAGCTCAG GGTGCAGATG CGCACCGAGA TCGCCAAGCT GCACAACAGG
ATCGGGACCA CCACCATCTA CGTCACCCAC GACCAGACCG AGGCCATGAC GATGGCCGAC
AGGATCGTGG TCCTCAAGGA CGGGGTGGTG CAGCAGATAG CCCCGCCGCA GGAGATGTAC
GACCACCCGG AGAACATCTT CGTGGCCGGG TTTATCGGCT CTCCGGCGAT GAACTTCATC
ATGGCGCGCC TGGAGAGGGA GGACTCTGGC TTTGTGGCGA CCTTCGGCCG GACCCGGGTC
CCCATCCACG AGGAGGCCGT ACGCTTCGCC AGGGAGCGCG GCAGGGAGCT GGAGGCCTAC
GCCGGCAAGG AGGTCGTCCT GGGGATAAGG CCCGAGCACA TAGAGGACGC CCGGTTCGCC
GAGGAGGCGG GCGCCCGGGA GAGCACCATA GAGGTCGAGC CGCAGGTCAT AGAGAGCATG
GGCAGCGAGA AGTACGTCTA CTTCGACGTG CCCCGGGAGC AGCACGCCCA CACCCGGACC
ATCGACGAGA TGGAGGCCGA GGTCGGCACC GGCGACGGGG GCGCCGAGTC GGAGGCCGCC
GGCGGCGGGG AGAGCGGCGA GCTGATGGTG GCCAGGGTCT CGGCGGAGAG CGACGCCCGG
GAGGGCCACA AGGTTCTGCT GGTCATCGAC TCCTCCAAGG TCCACCTCTT CGACCCGGAG
ACCGAGAAGG CCATCCTGTA G
 
Protein sequence
MPEAGGSVSF GEEEVGEMAE VTLENVTKVY GEDVVAVRDM NLDIPDGEFV VFVGPSGCGK 
STALRMIAGL EDISSGKIFI GDELVNDKPP RERDIAMVFQ NYALYPHMNV RENMGFALKL
RKMPKDEINR RVEEAARILG IERFLDRKPK ALSGGQRQRV ALGRAIVREP KAFLMDEPLS
NLDAKLRVQM RTEIAKLHNR IGTTTIYVTH DQTEAMTMAD RIVVLKDGVV QQIAPPQEMY
DHPENIFVAG FIGSPAMNFI MARLEREDSG FVATFGRTRV PIHEEAVRFA RERGRELEAY
AGKEVVLGIR PEHIEDARFA EEAGARESTI EVEPQVIESM GSEKYVYFDV PREQHAHTRT
IDEMEAEVGT GDGGAESEAA GGGESGELMV ARVSAESDAR EGHKVLLVID SSKVHLFDPE
TEKAIL