| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1983 |
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| Symbol | |
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| ID | 4115736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 2004570 |
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| End bp | 2005937 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 638036770 |
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| Product | selenocysteine synthase |
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| Protein accession | YP_644742 |
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| Protein GI | 108804805 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.484837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGACG CCGAGAGGCA GAGCCGCCTG AGGAGCCTCC CCGCGGTCGA CGCGGTGCTG
CGCGGGCCCG CGGCGGGCCT GGCCGCGCGC CACGGCCGGG CCGCGGTCGC GGCGGCGGTG
CGCGAGGTGC TGGAGGGGCT GCGGCGCGAG ATAGCCGCCG GGGGCTCGCC CGACGTCTCG
GGGAGGGCGG TGGCCGAGGG GGCGGCCCGC CTCCTCTCCG GGCGGGGGCT CCGGCGGGTG
GTGAACGCCA CCGGGGTGGT GCTCCACACC AACTTGGGCC GCGCCGTGCT CTCGGAGCGT
GCGGCGGCGG CCGCGGCGCG GGCCGGCACC TCATACTCCA ACCTGGAGTA CGACCTCTCC
CGCGGGCGGC GCGGCTCCCG CTACGACCAC GCCGTCCCCC TGCTGCGGGA GCTCACCGGG
GCGGAGGACG CGCTGGTGGT CAACAACTGC GCGGGGGCCA CGCTGCTCGC CCTCTCGGCG
CTCGCCGGGG AGGAGGGCGA GGGGCCGCCG GAGGTGGTCG TCTCGCGCGG CCAGCTCATC
GAGATCGGGG GCGGCTTCCG CATCCCGGAG GTGCTGGAGC TCTCGGGGGC CGTCTTGCGG
GAGGTGGGCA CCACCAACCG CACCCGGCTC TCGGACTACG AGCGGGCCCT GAGCGAGCGG
ACCCGCGCCA TCCTGTGGGT GCACCCCTCG AACTTCGAGA TCCGGGGCTT CACCGAGTCC
GCTGGGATCG CGGAGCTCGC CGGGCTGGGA CCCCCGGTGG TCGCGGACCT GGGCAGCGGG
GCGCTTCTCC CGCTGGGCGG GGAGCCCCTG GTGCAGGCCG CCCTCCGGGA CGGGGCGGAG
CTCGCTCTCT TCTCCGGCGA CAAGCTGCTC GGCGGCCCGC AGGCCGGGAT CGCCGCCGGT
TCGAGCCGCC TCGTGCGGCG GATGCGCCGG CACCCGCTGG TCCGGGCGCT GCGGGCGGAC
AAGCTGTGCC TCGCGGCGCT GGAGGCGACG CTGCGGGCCT ACCTGGAGGG CCGCGCGGAG
GAGGAGGTGC CGGCGCAGCG GATGCTCCGG GAGCCCCTGG AGGGGGTGGA GGCGCGCGCC
CGGCGTCTGG CCTCCGCCCT GAGCCGGGAG GTGCCGGGCC TCGAGGTTGG GGTCGTGCCC
TCCGTCGCCC GCAGCGGCGG GGGGACGCTG CCGGGCTACG AGATCCCTTC CTTCGCCGCG
CGCGTCCTGG GGGCGGACGC CGAGGCCCTC GCCGCCCGCC TGCGGGCGGC CGAGCCGCCG
GTGGTGGGGC GGGTGCACGA GGGGGCGCTG CTGCTGGACG CGCGCACGCT CCTGCCCGGC
GACGAGGAGG CCGTGGTGGA GGCGTTGCGG GAGGCCGCCC GTGGGTGA
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| Protein sequence | MLDAERQSRL RSLPAVDAVL RGPAAGLAAR HGRAAVAAAV REVLEGLRRE IAAGGSPDVS
GRAVAEGAAR LLSGRGLRRV VNATGVVLHT NLGRAVLSER AAAAAARAGT SYSNLEYDLS
RGRRGSRYDH AVPLLRELTG AEDALVVNNC AGATLLALSA LAGEEGEGPP EVVVSRGQLI
EIGGGFRIPE VLELSGAVLR EVGTTNRTRL SDYERALSER TRAILWVHPS NFEIRGFTES
AGIAELAGLG PPVVADLGSG ALLPLGGEPL VQAALRDGAE LALFSGDKLL GGPQAGIAAG
SSRLVRRMRR HPLVRALRAD KLCLAALEAT LRAYLEGRAE EEVPAQRMLR EPLEGVEARA
RRLASALSRE VPGLEVGVVP SVARSGGGTL PGYEIPSFAA RVLGADAEAL AARLRAAEPP
VVGRVHEGAL LLDARTLLPG DEEAVVEALR EAARG
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