| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1977 |
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| Symbol | |
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| ID | 4115730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1997697 |
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| End bp | 1999238 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 638036763 |
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| Product | uroporphyrinogen-III C-methyltransferase / uroporphyrinogen-III synthase |
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| Protein accession | YP_644736 |
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| Protein GI | 108804799 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0007] Uroporphyrinogen-III methylase
[COG1587] Uroporphyrinogen-III synthase |
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| TIGRFAM ID | [TIGR01469] uroporphyrin-III C-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0017868 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCTACC TGGTCGGCAG CGGGCCGGGC GACCCCGGGC TGATCACCGC CAAGGGGCTC
AGGCTCCTCG AGGAGGCCGA CGCCGTGGTC TACGACCGGC TCGCGCCGGG GGCGCTGCTG
CGGCGCGCCC GGCCGGACGC CGAGCTCTTC TACGTCGGCA AGCGGCCCGG CGACGACCAG
GCGATGAAGC AGGACGAGAT CAACGCGCTG CTCGTCCGGC TCGGCAGGGA GGGCAGGCGG
GTGGTGCGGC TCAAGGGCGG CGACCCCTAC GTCTTCGGCC GGGGCGGGGA GGAGGCGCTG
GCGCTGCTCC GGGCCGGCGT CCCCTTCGAG GTAGTGCCCG GGGTGACCAG CGGGATCGCC
GCCCCCGCCT ACGCCGGGAT CCCCGTGACC CACCGCGCCC TCGCCTCGAG CGTGGCCTTC
GTCACCGGCC ACGAGGACCC CTCCAAGGGC CGGACGGACG TGGACTGGGA GCGGGTGGCC
CGCGGGGCGG ACACCCTGGT GCTGTACATG GGGGTGGGGC GGCTCGGCGA GATAGCCTCC
TCGCTCGTCG CCGCCGGGCG CGACCCGGCC ACCCCCGCGG CGGTGATCCG GTGGGGGACG
GTCCCCGAGC AGCGGACCGT CACGGGCACC CTCGCGGACA TCGCGCAGAG GGTGGCGGAG
GCCGGGATAC GGCCGCCGGC GGTGACCGTC GTCGGGGAGG TGGTCCGGCT GCGGGAGGAG
GGGCTCGCCT GGTACGAGGC GCGGCCGCTG TTCGGGCGGC GGGTGGTGGT CACCCGGGCC
CGGGCGCAGG CGGGGGAGCT CTCGCGGCGG CTGGAGGAGC TGGGCGCCGC CGTGGTGGAG
TTCCCGACCA TCGAGATACG GCCCCCCAGG GACTTCGGGC CGCTGGACGA GGCGATCAGG
GGCCTCGACT CCTTCGACTG GCTGGTCTTC ACCAGCGTGA ACGGGGTCGA GGCGTTTCTG
GAGCGGCTGG CCTCTCACGG GCTCGACGTG CGGGCGATCC CGCGGGGGGC CAGGATCGCC
GCCATCGGGC CCGCCACGGC GGGCCGGGTG CGGGAGGCGG GGCTGCGGGT GGACGTGGTC
CCGAGGGAGT ACCGCGCCGA GGCGCTGCTG GAGGAGATCT CGGGGGAGCC GCTGCGTGGC
AGGCGCGTCC TGATCCCGCG GGCCGCCCGG GCGCGGGAGG TGCTCCCCGA GCGGCTGCGG
GAGGCCGGCG CGGAGGTCTC CGTCCCGCCG GCCTACGAGA CGGTCCCCTC CGCCGAGGGG
CGGGAGGAGC TCGCGCGCGG GCTCCAGGCC GGGGAGGTGG ACTGCGTGAC CTTCACGGCG
AGCTCCACCG TCGAGAACTT CGTGGCGGCT TTCGGCGCGC GGGAGGCCGC CCGCCTCCTG
GCCGGGACCC GGGTGGCCTG CATCGGCCCC ATAACCGCCG CCGCGGCCCG GGAGCGCGGC
CTCCGGGTAG ACGTCGAGGC CGGGGAGTAC ACTATAGAGG GGTTGGTGAG GGCGGTGGCC
GGGCTCTTCG CCGCCCGCGC GCCGCAAGAG AGGGTAGGGT GA
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| Protein sequence | MIYLVGSGPG DPGLITAKGL RLLEEADAVV YDRLAPGALL RRARPDAELF YVGKRPGDDQ
AMKQDEINAL LVRLGREGRR VVRLKGGDPY VFGRGGEEAL ALLRAGVPFE VVPGVTSGIA
APAYAGIPVT HRALASSVAF VTGHEDPSKG RTDVDWERVA RGADTLVLYM GVGRLGEIAS
SLVAAGRDPA TPAAVIRWGT VPEQRTVTGT LADIAQRVAE AGIRPPAVTV VGEVVRLREE
GLAWYEARPL FGRRVVVTRA RAQAGELSRR LEELGAAVVE FPTIEIRPPR DFGPLDEAIR
GLDSFDWLVF TSVNGVEAFL ERLASHGLDV RAIPRGARIA AIGPATAGRV REAGLRVDVV
PREYRAEALL EEISGEPLRG RRVLIPRAAR AREVLPERLR EAGAEVSVPP AYETVPSAEG
REELARGLQA GEVDCVTFTA SSTVENFVAA FGAREAARLL AGTRVACIGP ITAAAARERG
LRVDVEAGEY TIEGLVRAVA GLFAARAPQE RVG
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