| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1975 |
|---|
| Symbol | |
|---|
| ID | 4115728 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1995369 |
|---|
| End bp | 1996688 |
|---|
| Gene Length | 1320 bp |
|---|
| Protein Length | 439 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 638036761 |
|---|
| Product | glutamate-1-semialdehyde 2,1-aminomutase |
|---|
| Protein accession | YP_644734 |
|---|
| Protein GI | 108804797 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0001] Glutamate-1-semialdehyde aminotransferase |
|---|
| TIGRFAM ID | [TIGR00713] glutamate-1-semialdehyde-2,1-aminomutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.102395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGGCT TGCAGGAGGC CCGCCTCCGG CTCGCCCGGG ACCGCTCGGC CCGGCTGATG
GAGCGCGCGG TGCGCCGGAT GCCGGGCGGG GTGAACAGCC CGGTGCGGGC CTTCCGCTCC
GTGGGCGGCG ACCCGCTGTT CATGGAGCGG GGCGAGGGGC CCAGGATCTT CGACGCCGAC
GGCAACGCCT ACATAGACTA CGTCATGAGC TACGGCCCGC TCCTTCTGGG CCACGCCCCG
CCGGAGGTGG TGGGGGCCGT GGAGCGGGCG GCCCGCCGGG GCACCACCTT CGGCGCGCCC
ACCCGGCTGG AGGTGGAGCT CGCCGAGCTG GTGTGCGAGG CGGTCCCCTC CGTGGAGGTC
GTGCGGATGG TCAACTCGGG CACCGAGGCC ACCATGAGCG CCGTGCGCCT GGCCCGGGGC
TACACCGGGC GCGAGAAGAT CCTGAAGTTC GACGGCAACT ACCACGGCCA CGGCGACGCC
CTGCTCGTCT CCGCCGGGAG CGGGGTGGCC ACGCTGGGGC TTCCCGACAG CCCCGGCGTG
ACGCCGGGGG CCGCCCGGGA CACCGCCGTC CTGCCCTACA ACGACCTGGA GGCGGTGCGG
GAGCTCTTCG AGGAGCGGGG GGAGGAGTTC GCCGCCGTCA TCCTGGAGCC CGTGGCGGGG
AACATGGGCT GCATCCCCCC GGAGGAGGGC TTTCTGGAGG GCCTGCGCGA GATAACCGCC
GCCTGCGGGG CGCTCCTGAT CTTCGACGAG GTCATGACCG GGTTCCGGGT CTCCCGCGGC
GGGGCGCAGG AGCGCTACGG CGTGGTCCCG GACCTCACCT GCCTGGGCAA GGTCATCGGC
GGAGGGCTCC CCGTCGGGGC CTACGGGGGG CGGCGCGAGA TCATGGAGCG CGTCGCCCCC
GCCGGCCCCG TCTACCAGGC CGGGACCCTC TCGGGCAACC CGCTGGCCAT GTCCGCCGGG
CTGGCCACCC TGCGCAGGAC CGGGGAGCCC GGCTTCTACG AGCGGCTGGA GGAGCTCGGC
GCCCGCTGGG AGCGCGGGAT GCGGGAGGCC GCCTCCGGCT CCGCCGTCCC CGTGACGGTG
AACCGGGTGG GCTCGATGGT GAGCCTCTTC TTCGCCTCCG GGCCGGTCCG GGACTTCGCC
TCCGCCGCCG CCTCTGACGC GGAGCTCTTC AAGGACTTCT TCTGGCACAT GCTCTCGCGC
GGCGTGTACC TGGCCCCCAG CCAGTACGAG GCGGGCTTTA TCTCGCTCGC CCACTCCGAG
GAGGAGATAG ACCGGACGGT GGAGGCCGCT GCCGAGTGGT TCGCCGGGAG GCGGGCTTGA
|
|---|
| Protein sequence | MSGLQEARLR LARDRSARLM ERAVRRMPGG VNSPVRAFRS VGGDPLFMER GEGPRIFDAD
GNAYIDYVMS YGPLLLGHAP PEVVGAVERA ARRGTTFGAP TRLEVELAEL VCEAVPSVEV
VRMVNSGTEA TMSAVRLARG YTGREKILKF DGNYHGHGDA LLVSAGSGVA TLGLPDSPGV
TPGAARDTAV LPYNDLEAVR ELFEERGEEF AAVILEPVAG NMGCIPPEEG FLEGLREITA
ACGALLIFDE VMTGFRVSRG GAQERYGVVP DLTCLGKVIG GGLPVGAYGG RREIMERVAP
AGPVYQAGTL SGNPLAMSAG LATLRRTGEP GFYERLEELG ARWERGMREA ASGSAVPVTV
NRVGSMVSLF FASGPVRDFA SAAASDAELF KDFFWHMLSR GVYLAPSQYE AGFISLAHSE
EEIDRTVEAA AEWFAGRRA
|
|---|
| |