Gene Rxyl_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1966 
Symbol 
ID4115758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1988224 
End bp1989129 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content69% 
IMG OID638036752 
ProductUbiA prenyltransferase 
Protein accessionYP_644725 
Protein GI108804788 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGTAGAAA CCGCATTCGT GGACGCTGGC CGCAAGAGGG CATCTGCGGG TTCCTACCTC 
CGACTGGCCC GGCCCAAGCA GTGGACCAAG AACGGTTTCG TGCTCGCGGG GCTGGTCTTC
TCGGGGGAGG CCTTCGTGCC TTCCTCGGTC GCCTCGGCGC TGCTGGCCTT CGCCGCCTTC
TGCGCGCTCT CGGGGGCGGT CTACGCCGTC AACGACGTGC TTGACGTGGA GGAGGACCGC
AAGCACCCGC GCAAGCGCCT CCGGCCGGTG GCCAGCGGGG AGATCCCGCC GCGCGCCGCG
GTCGCCTTCG CGGCGGCCCT CGCGGCGGCG GGGCTCGCCG CCGGCTTCTA CGTGGGGGTT
GGCGTGGGGG TCTCCGGGGT CGCCTACCTG CTGCTGCAGG CGCTCTACAC CGGGGTGCTC
AAGCACCTCG CGATCCTCGA CGTCATGTCC ATCTCGGCGG GCTTCATCAT CCGGGCGCTC
GCGGGGGCGC AGGCGGTGGG GAGCCCCATC TCCCCGTGGC TGCTGGTGTG CACCGGGCTC
CTGACCCTGT TCCTGGGCTT CACCAAGCGC CGCTACGAGC TGGCCTCGCT GGGCGACGGG
GCGGCGGTGC ACCGGCGGAA CCTCAAGGAC TACTCGGTGC CGCTGCTCGA CGAGATGATG
AACATAATGC TCGCCGCCAC CATAATCGCC TACTCCCTCT ACACCTTCTT CGTGTACGCC
AACGGGGAGC AGATCTTCAT GATGGCCAGC ATCCCGTTCG TGGTCTACGG GGTGCTGCGC
TACATGCTCC TCGTGCACCG GGACGGGGGC GGCAACCCGG ACACCCTGCT GCTCAGGGAC
CGGCCGCTCC AGGTCACGCT GCTGCTGTGG CTCGCCGTCG TGATGTTCGT CCTGTACTTT
CTGTGA
 
Protein sequence
MVETAFVDAG RKRASAGSYL RLARPKQWTK NGFVLAGLVF SGEAFVPSSV ASALLAFAAF 
CALSGAVYAV NDVLDVEEDR KHPRKRLRPV ASGEIPPRAA VAFAAALAAA GLAAGFYVGV
GVGVSGVAYL LLQALYTGVL KHLAILDVMS ISAGFIIRAL AGAQAVGSPI SPWLLVCTGL
LTLFLGFTKR RYELASLGDG AAVHRRNLKD YSVPLLDEMM NIMLAATIIA YSLYTFFVYA
NGEQIFMMAS IPFVVYGVLR YMLLVHRDGG GNPDTLLLRD RPLQVTLLLW LAVVMFVLYF
L