Gene Rxyl_1952 details

Gene Information

• Locus tag: Rxyl_1952
• ID: 4115744
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 1973708
• End bp: 1975669
• Gene Length: 1962 bp
• Protein Length: 653 aa
• Translation table: 11
• GC content: 76%
• IMG OID: 638036738
• Product: O-antigen polymerase
• Protein accession: YP_644711
• Protein GI: 108804774

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.953343
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCGCCG CCTCCCCCGG CAAGCCCCTC GCCGAGCACG GCCGGCTCGC CGCGAGCCTC 
GCGCTGTGCG CCCTCGCGCT GCTCGCCCCC TGGATGGGCT GGCGGTACGG GGGCTACTAC 
GTGGGCGGCT GGGCCCCTCC GGCCCTCGCC TCGGCGGCGC TGCTGCTCGT CCTCGCCGCC 
GCCGGCGCGC TCGGCAGGAT GCGCTCTTCC TGGGGCGCGG CCGCGGCCGC CCTGCTCACC 
GGCTACGCCG CGTGGACCTT CCTCTCGCTG CTGTGGTCCC CGGACCGCGG AGAGGCCTGG 
CAGGGGGCGG GGCTCACCCT CCTGTACCTG ATGGCCTTCT GGGCCGCCCT CTCCCTGCTC 
TCCTCCGGAG CCTCCCGCCG CTGGGCGCTC GCCGCCTGCG CGCTGGGGAC CGGCGCGGTG 
GCCGCCCTGA CGCTCCCCCG GCTGGCCCCG GAGGCGGAGG AGCTCTTCGT GAACGGGCGC 
CTGCTCGGGA CCGCCGGCTA CTTCAACGCC GAGGCCGCCT TTCTGCTGCT CCCCTTCTGG 
GCGGCCCTCT GCCTGGCGGG CTCCCCGCGG GTGAACCCGC TGCTGCGGTG CCTGGCCCTC 
GCCGCGGCGG CGCTCTGCTC GCAGCTTGCG GTCCTCACCC AGTCGCGGGG GGCGGCGATG 
GCCCTCGCCG CCTCGCTCCC GGTGTTCTTC CTGCTGTCGG GCCGGCGGAT GCGGGGAGCT 
CTGGCCCTGC TGCCGGTCGC GGCGGCGCTC ATCCTGAACT TCCCGCAGCT CAACGGGGTC 
TACCTGGCCG GCGAAGGGGC CGCCCTGGAG GAGGCGTTGC GCCGCGCGGT GCCGCAGGTG 
TGGCTCGCCG CCCTCGCCTG CGGGCTGTAC GGGCTGGGGT GGGCGCTGCT CGACGCCCGC 
TGGAGGCCGC CCGCCCGCGC GGCGCGCGCG GCCGGGGCCG CCACCCTCGC CGCGCTGCTG 
CTCCTCGCGG CGGCGGGCGG GGCCGCCTTC TACGCCCGGG AGGGGAGCCC CGTGCGGTGG 
GTCCAGCAGA AGGCGGAAGC CTTCCAAAAC GGCGACCGCT CGGGGCAGGA GCAGAGCCGC 
TACCTGAGCG CCTCGGGCTC GGGCCGGCTC GTGATGTGGC GGGTGGCCTG GGAGGACTTC 
GCCCGCCACC CGGTGCTGGG GGTGGGCACC CACAACTACG AGGCCACCTA CTACCGGCTG 
CGAGGCGAGA GGGCGGGCTA CGTGCGCCAG CCGCACTCGC TGCCGCTGGA GGCGCTGGCC 
GAGAGGGGCG TGGTGGGCGG GGCGCTGCTC GCGGGCTTTC TCGGGGTGTG CTTTGCGGCG 
GGATTGCGCC GGTTCGGCGG CCTGAACGCG GAGGGGCGAA CGCAGCTGGC GGCGGCCTGC 
GCGGCGGCGG CGTACTGGCT GGCGCACTCC GGCCTGGAGT GGTTCTGGCA GTTCCCGGCG 
ATCACGCTCC CGGCCATGCT CTGCCTGGCC GCTCTGGCCG CGCCCTGGAG CCGCGGAGAG 
GGGGAGGGCG GGGCCGGAGG CCGGACGGAG CGTTCCCTGC GGCTCGCCGG TGCGGGGCTC 
GCCGCCCTGA TGCTCGCCAC CGCGCTCCCG CTGTACGCCG CCGACCGCTA CGCGCAGCAG 
AGCGCGGCGG CCGAGAACCC GTGGATGGCC CTCCAGAGGC TGGAGACGGC CCGGCGCCTC 
AACCCGGTCA GCGCCGAGCT TCCGCTGCGC GAGGCGGAGC TGCTGGAGCG GGTGGGGGAC 
TGGCCGGGGG CAACCGGGGC GTACGCCGAG GCGATACGGC TCTCCCCCGA GCACTACGCC 
CCCTACGCGG CGATGGCGGG CTTCTACGAG CGCCACGGCG ACGCGCAAAA CGCCCTCGAG 
CTCTACAGAA GGGCGCTGGA GCTTAACCCC CTGGAGCCCG CCCTGCGGGG CAAGGTGCGG 
CGGCTCGAGG AGGCTAGTCC CAGTTCGCCC GCTCGCGGAT GA 

 

Protein sequence

MSAASPGKPL AEHGRLAASL ALCALALLAP WMGWRYGGYY VGGWAPPALA SAALLLVLAA 
AGALGRMRSS WGAAAAALLT GYAAWTFLSL LWSPDRGEAW QGAGLTLLYL MAFWAALSLL 
SSGASRRWAL AACALGTGAV AALTLPRLAP EAEELFVNGR LLGTAGYFNA EAAFLLLPFW 
AALCLAGSPR VNPLLRCLAL AAAALCSQLA VLTQSRGAAM ALAASLPVFF LLSGRRMRGA 
LALLPVAAAL ILNFPQLNGV YLAGEGAALE EALRRAVPQV WLAALACGLY GLGWALLDAR 
WRPPARAARA AGAATLAALL LLAAAGGAAF YAREGSPVRW VQQKAEAFQN GDRSGQEQSR 
YLSASGSGRL VMWRVAWEDF ARHPVLGVGT HNYEATYYRL RGERAGYVRQ PHSLPLEALA 
ERGVVGGALL AGFLGVCFAA GLRRFGGLNA EGRTQLAAAC AAAAYWLAHS GLEWFWQFPA 
ITLPAMLCLA ALAAPWSRGE GEGGAGGRTE RSLRLAGAGL AALMLATALP LYAADRYAQQ 
SAAAENPWMA LQRLETARRL NPVSAELPLR EAELLERVGD WPGATGAYAE AIRLSPEHYA 
PYAAMAGFYE RHGDAQNALE LYRRALELNP LEPALRGKVR RLEEASPSSP ARG