Gene Rxyl_1945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1945 
Symbol 
ID4115795 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1967689 
End bp1968762 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content67% 
IMG OID638036731 
Producthypothetical protein 
Protein accessionYP_644704 
Protein GI108804767 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.266069 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACAGCC GCGGCAGACA GGGGCGCGCC CGGCGCGCCT CAGGACGGGT ATGGGCGCTT 
GCCGGAGCCC TGCTGCTAGC TCTGGCGCTA CAGGGCCTTT CGGCTCCGGA GGGCCGCGAG
GCGGGGGCGG CGACCGCCTG CGACAGGTAC GCATCGGTAA AGGGCTCAGA CCGCGCCCGG
GGGACGGCCT CCGCACCGTT CAGGACCGTT CAGCGGCTCG CCGACTCGCT CAGGGATGGG
CAGGTGGGGT GCCTTCGCAC CGGCACCTAC ACTGCGCCGG ACGGGACGGT GAAGGTGCGG
CGGGCCGGCA TAACGCTGCG GAGCGCGCCG GGACACAGGG CCACCATCAA GGCCCGCGCG
TACGTGGTCG CGGGGGCAAA CCGGGCGACC CTCAAGAGCC TGAAGATACT CGGGGCGCCG
GGCAAGGCGA ACGTGCTCGT CCGCGCCGAC CGCGTGCGTC TGATCCGGAA CAACATAACC
AACAACAACC GTCCCGCGAG CTGCATCCTC GTCGGGAGCC GCGCCAACGG GGGCATCGTA
GCCAGCGGAA CCAGGATCAG GGGCAACCGC ATCCACCACT GCGGCGAGCT GCCGCGGAGC
AACCGCCATC ATGGCATCTA CGTGAGCGCC GGCAGAGCGA CCTCCATCAC CAACAACCTC
ATCTACGCGA ACGCCAACCG GGGAATACAG CTCTACCCCG ATGCCCGGGG CTCTCTCATA
AAGGGCAACA TCATCGACGG CAACGGAGAG GGCGTGCTCT TCTCCGGCGC CGGACCCTAT
GCGTCCTCCG ACAACGCGGT GAAAAACAAC GTGATCTCCA ACTCCCGCCG CTGGAACGTG
TACTCGGTCT GGAACCAGAC AAGCAGGACC GGCAGCGGCA ACGTCGTCTC ATACAACTGC
CTCTGGGCCT CGAGCGCAAA CCCACGCTAC AGAAAGAACG GCGGCATCTC CGGCTCCAAC
GGCGGCTTCT CAGCCCACCA CAACGTCTTT GCCAGGCCCC TGTACGCAGA CCGGGATGCC
GGAGACTTCA GGCTCGGCCG CAACAGTAAC TGCAGGAAGG TGTTCGGCGG CTGA
 
Protein sequence
MDSRGRQGRA RRASGRVWAL AGALLLALAL QGLSAPEGRE AGAATACDRY ASVKGSDRAR 
GTASAPFRTV QRLADSLRDG QVGCLRTGTY TAPDGTVKVR RAGITLRSAP GHRATIKARA
YVVAGANRAT LKSLKILGAP GKANVLVRAD RVRLIRNNIT NNNRPASCIL VGSRANGGIV
ASGTRIRGNR IHHCGELPRS NRHHGIYVSA GRATSITNNL IYANANRGIQ LYPDARGSLI
KGNIIDGNGE GVLFSGAGPY ASSDNAVKNN VISNSRRWNV YSVWNQTSRT GSGNVVSYNC
LWASSANPRY RKNGGISGSN GGFSAHHNVF ARPLYADRDA GDFRLGRNSN CRKVFGG