| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1944 |
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| Symbol | |
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| ID | 4115794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1966609 |
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| End bp | 1967370 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638036730 |
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| Product | lipopolysaccharide biosynthesis |
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| Protein accession | YP_644703 |
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| Protein GI | 108804766 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3944] Capsular polysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.129539 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACAG ACACCACGAC CGCCAGAGAG GCCGCCCCCG CCGGGAGGGA TGCGTTCTTC
TCCGCGAAGG AGTTTCTCAA GGTCTTGCGC CGCCGCGCCT GGGCGGTGGT CTTCGTGGCC
TCCGCTCTTG CGGCCTCGGC GGTGGGCTTC GGCCTGCTGC AGACGCCGGT GTATGAGGCC
TCGATCACGA TCCTGGTCGG CCAGAAGAGC GGGGAGGAGG GGCCGCGCAA CCTCAGCGGG
GACGTCGAGG GGCTGCAGCA GCTCGCGCAG ACCGTGGCCG AGGCGGTGGC CACCCGCCCG
ATAGCGGAGG CCGCCGCGCA GAAGCTGGGG CTCTCCGAGG AGTACGCGCA GAAGACCCTG
CTCGGCAACC TCCGGGTCGA GCAGCGCCCG GGCACGATGT TCGTCGAGGT CCGCTACCGC
GACCCGGACC CGCAGCGGGC GCAGCGGGTG GCGAACGCCG TCGGCGAGGT CTTCTCCGAG
AGGGTCTCGG AGGTCAGCCC GGGGGCGAAC GCCATCACCG CCACGGTGTG GGAGGAGGCG
GTCGCCCCCG AGACGCCGGT GAGCCCCGAC CCGCTGCTGA ACGGGCTGGT GGCGCTGGCG
CTGGGGCTGC TGCTGGGGCT GGGGCTGGCC TTTCTGCTGG AGTACCTCGA CGACAGCTGG
GAGTCGCCGG AGGAGGTCGA GAGGGTCTCC GGGGTGCCCA CCTTCGGCGT GATCCCGGGC
TTTCAGGTGA AGACGAGCGA GAAAAAGAAA GGCGGTGGGT AG
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| Protein sequence | MSTDTTTARE AAPAGRDAFF SAKEFLKVLR RRAWAVVFVA SALAASAVGF GLLQTPVYEA
SITILVGQKS GEEGPRNLSG DVEGLQQLAQ TVAEAVATRP IAEAAAQKLG LSEEYAQKTL
LGNLRVEQRP GTMFVEVRYR DPDPQRAQRV ANAVGEVFSE RVSEVSPGAN AITATVWEEA
VAPETPVSPD PLLNGLVALA LGLLLGLGLA FLLEYLDDSW ESPEEVERVS GVPTFGVIPG
FQVKTSEKKK GGG
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