Gene Rxyl_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1939 
Symbol 
ID4115789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1960995 
End bp1962149 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content76% 
IMG OID638036725 
Productglycosyl transferase, group 1 
Protein accessionYP_644698 
Protein GI108804761 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.324498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCCGGG TGCTGCACGT GCTCCCCAGG ATCGGGCCCG GCGGGGCCGA GACGATGGCC 
GTGCGCCTGA TGCTGGGGCT GGACCGCGGC CGCTTCGAGG TGGGGGCCGC AAGCCTCTTC
GACCCTTCGG GCACCGGGCA GGAGGCGGCG CTGGCGGAGG GCGGCGTGCC GGTGTGGTAT
CTGGGCAAGC GCCGGGGCCC GGACCCGCGG ATGCCCCTGC GGCTCTCCGC GGTGGTGGCG
CGCTTCGGGC CCCACGTGCT CCACACCCAC CGCCACGTGC TCTACTACGC CCTGCCCCCG
CTCCTGCTGC GGAGGGTCCC GGCCGTCGTC CACACCGTGC ACACCCTCCC GGAGAGGGAG
GTGGGGGCCG CCGGCCGGCT GGCGCACCGG CTGGCCTTCC GGCGCGGCGC GGTCCCCGTG
GCGATAGCCG CCGGGATCTC CGAGGGGCTG CGGCGCGTCT ACGGGATCTC CGGCGGCCCG
CTCATACCGA ACGGCATCCC GCTCGAGGCC TTCTCCCGGT CCGCGTCCCG CCGCGCGGCC
TGGCGGAGGA AGGAGGGCTT CTCTTCCGGG GACGTGCTCT TTGTCTGCGT GGCCCGCCTC
AGCCCGGAGA AGCGGCACGC CGTGCTCCTG GAGGCCTTCG CCCGGTGCGC CGCGGGGTTC
CCCCGGGCGC GGTTGCTCCT GGCGGGCGAT GGCGAGCTGC GGGGGGAGAT CGCGCGCCGC
ATAGAGGGTC TCGGGCTGCG GGGGAGGGCT TTTCTGCTCG GGGTCCGCCC CGACGTCCCG
GACATCCTCG CCGCCTCCGA TGTCTTCGTC CTGGCCTCCG CCTGGGAGGG GAACCCGCTC
TCGGTGATGG AGGCCATGGC GGCCGGGCTC CCCGCCGTGT GCACCGCGGT GGGCGGGGTG
CCGGAGCTGT TGGAGAGCGG CGTCTCCGGG TTGCTCGTGC CCCCGGAGGA TCCGGGGGAG
CTCGCCGGGG CCCTAGAGCT CTTGCTGCGC GACCGCGCGC TGCGGGAGCG GCTGGGCCAG
AGGGCCGCCG CGACCGCCGC CTCTCGCTTC GGGCTCGGGA CGATGGTCCG GGCGTACGAG
GAGCTCTACC GCTCGCTGCT TTCCGCCGCA CCGGACCTTC GGGAGGAAGA CGCGGAGGGG
GCGCGGTGCG CCTGA
 
Protein sequence
MIRVLHVLPR IGPGGAETMA VRLMLGLDRG RFEVGAASLF DPSGTGQEAA LAEGGVPVWY 
LGKRRGPDPR MPLRLSAVVA RFGPHVLHTH RHVLYYALPP LLLRRVPAVV HTVHTLPERE
VGAAGRLAHR LAFRRGAVPV AIAAGISEGL RRVYGISGGP LIPNGIPLEA FSRSASRRAA
WRRKEGFSSG DVLFVCVARL SPEKRHAVLL EAFARCAAGF PRARLLLAGD GELRGEIARR
IEGLGLRGRA FLLGVRPDVP DILAASDVFV LASAWEGNPL SVMEAMAAGL PAVCTAVGGV
PELLESGVSG LLVPPEDPGE LAGALELLLR DRALRERLGQ RAAATAASRF GLGTMVRAYE
ELYRSLLSAA PDLREEDAEG ARCA