Gene Rxyl_1937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1937 
Symbol 
ID4115787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1958564 
End bp1959802 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content75% 
IMG OID638036723 
Productglycosyl transferase, group 1 
Protein accessionYP_644696 
Protein GI108804759 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGGAA AGGTCCTGAT CATGTCCCAG TTCTTCCCCC CGGAGACCTA CGCCGGGGCG 
AACCGCCTGG GCCCCATGGC CGAGATGCTC GCGGAGCGCT TCGAGGTGAC CGTGGTGACC
GTGAGGCCGA GCTACCCCTC GCCGGAGGAC TACGCCGGCC TCCTCCTCGA GGAGCACGAC
GCGGCGCTCC CCTGCCGGGT GCTGCGGGCG CCGGCCTTCC GCCCGCACCG GGGCGGCATG
GTCTTCAGGA CGCTGCGGGA GCAAGCCCTG GCGGCGCGGC TCGCGCGCCG GGCCACTGGC
CCCGCGGACG TGGTCATCGC CTCCTCCCCC AGCATGTTCC TGGGGCCTGC CGGGCTGGCC
GCGGCCCGGG CGAAGGGGGC GGGCTTTGTG TGGGACGTGC GGGACGTCAC CTGGGGCTAC
GCCAGGGACA TCGTGGGCCA CGCCTCGCCG GTCATGGCGG CGGCGTCCCG GGCCCTCGAG
GGTTGCATGC GCCGGGTGCT GCGCCGGGCC GACCTTGTGG TCGGGGCCTC CGAGGGGATA
ACCGGGATGC TCGTGGAGGC CGGCGCCGAC CCTGGGAGGG CCGTTACGGT GCCGAACGGC
ATCTCCTCCG GGCTGCTGCG CGAGATCCGC AGGGCCGTCC CCGGCCCGCC GCAGGCCAAG
GCCCGGCCGC TCGTGGCCTA CGCGGGCCTG ATCGGCTACA ACCAGCACCT CGGCGCCCTG
GTCGAGGCCG CCCGCGCGCT CCCCGGGGCG GACTTCGTCG TCGCCGGGGA CGGCCCGGAG
CTCCCGCTGC TGCGGCGGAG GGCGGAAAGC CTCGGCCTCG CGAACGTCTC CTTCCCCGGG
TATCTGCGCC GGGAGGAGGT GCTGGCGCTC TACCGCCGGA GCGACGTCCT CTTCGCCCAG
GCGCGCGACG CGCCGGCCAT CAACGCCGGC ATGGTGCCGG TCAAGCTCTT CGAGTACATG
GCCGCCGGCC GCCCCGTGGT CTATGCCGGG AGGGGGCTCG CCGTCGAGCT GCTGCGGAGG
GCCGGGTGCG CCGTAACGGT GCCCCCGGAG GACCCGGCGG CGCTCCGGGG GGCCATAGAC
GGGCTGTTGC GGAGCCCCGG GCTCGGGCGA GAGCTCGGGC GCCGCGGAAG GGAGTTCGTG
TGCGCAAACT GCTGCAGGGA GAGCCTGATG GAGGAGCTCT CGGACGCGCT GGAGGAGCGC
TTCTTCCGGC GCGGGGCGCC GGTGGCGGTG GTGCCGTGA
 
Protein sequence
MKGKVLIMSQ FFPPETYAGA NRLGPMAEML AERFEVTVVT VRPSYPSPED YAGLLLEEHD 
AALPCRVLRA PAFRPHRGGM VFRTLREQAL AARLARRATG PADVVIASSP SMFLGPAGLA
AARAKGAGFV WDVRDVTWGY ARDIVGHASP VMAAASRALE GCMRRVLRRA DLVVGASEGI
TGMLVEAGAD PGRAVTVPNG ISSGLLREIR RAVPGPPQAK ARPLVAYAGL IGYNQHLGAL
VEAARALPGA DFVVAGDGPE LPLLRRRAES LGLANVSFPG YLRREEVLAL YRRSDVLFAQ
ARDAPAINAG MVPVKLFEYM AAGRPVVYAG RGLAVELLRR AGCAVTVPPE DPAALRGAID
GLLRSPGLGR ELGRRGREFV CANCCRESLM EELSDALEER FFRRGAPVAV VP