Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1937 |
Symbol | |
ID | 4115787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1958564 |
End bp | 1959802 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 638036723 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_644696 |
Protein GI | 108804759 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGGGAA AGGTCCTGAT CATGTCCCAG TTCTTCCCCC CGGAGACCTA CGCCGGGGCG AACCGCCTGG GCCCCATGGC CGAGATGCTC GCGGAGCGCT TCGAGGTGAC CGTGGTGACC GTGAGGCCGA GCTACCCCTC GCCGGAGGAC TACGCCGGCC TCCTCCTCGA GGAGCACGAC GCGGCGCTCC CCTGCCGGGT GCTGCGGGCG CCGGCCTTCC GCCCGCACCG GGGCGGCATG GTCTTCAGGA CGCTGCGGGA GCAAGCCCTG GCGGCGCGGC TCGCGCGCCG GGCCACTGGC CCCGCGGACG TGGTCATCGC CTCCTCCCCC AGCATGTTCC TGGGGCCTGC CGGGCTGGCC GCGGCCCGGG CGAAGGGGGC GGGCTTTGTG TGGGACGTGC GGGACGTCAC CTGGGGCTAC GCCAGGGACA TCGTGGGCCA CGCCTCGCCG GTCATGGCGG CGGCGTCCCG GGCCCTCGAG GGTTGCATGC GCCGGGTGCT GCGCCGGGCC GACCTTGTGG TCGGGGCCTC CGAGGGGATA ACCGGGATGC TCGTGGAGGC CGGCGCCGAC CCTGGGAGGG CCGTTACGGT GCCGAACGGC ATCTCCTCCG GGCTGCTGCG CGAGATCCGC AGGGCCGTCC CCGGCCCGCC GCAGGCCAAG GCCCGGCCGC TCGTGGCCTA CGCGGGCCTG ATCGGCTACA ACCAGCACCT CGGCGCCCTG GTCGAGGCCG CCCGCGCGCT CCCCGGGGCG GACTTCGTCG TCGCCGGGGA CGGCCCGGAG CTCCCGCTGC TGCGGCGGAG GGCGGAAAGC CTCGGCCTCG CGAACGTCTC CTTCCCCGGG TATCTGCGCC GGGAGGAGGT GCTGGCGCTC TACCGCCGGA GCGACGTCCT CTTCGCCCAG GCGCGCGACG CGCCGGCCAT CAACGCCGGC ATGGTGCCGG TCAAGCTCTT CGAGTACATG GCCGCCGGCC GCCCCGTGGT CTATGCCGGG AGGGGGCTCG CCGTCGAGCT GCTGCGGAGG GCCGGGTGCG CCGTAACGGT GCCCCCGGAG GACCCGGCGG CGCTCCGGGG GGCCATAGAC GGGCTGTTGC GGAGCCCCGG GCTCGGGCGA GAGCTCGGGC GCCGCGGAAG GGAGTTCGTG TGCGCAAACT GCTGCAGGGA GAGCCTGATG GAGGAGCTCT CGGACGCGCT GGAGGAGCGC TTCTTCCGGC GCGGGGCGCC GGTGGCGGTG GTGCCGTGA
|
Protein sequence | MKGKVLIMSQ FFPPETYAGA NRLGPMAEML AERFEVTVVT VRPSYPSPED YAGLLLEEHD AALPCRVLRA PAFRPHRGGM VFRTLREQAL AARLARRATG PADVVIASSP SMFLGPAGLA AARAKGAGFV WDVRDVTWGY ARDIVGHASP VMAAASRALE GCMRRVLRRA DLVVGASEGI TGMLVEAGAD PGRAVTVPNG ISSGLLREIR RAVPGPPQAK ARPLVAYAGL IGYNQHLGAL VEAARALPGA DFVVAGDGPE LPLLRRRAES LGLANVSFPG YLRREEVLAL YRRSDVLFAQ ARDAPAINAG MVPVKLFEYM AAGRPVVYAG RGLAVELLRR AGCAVTVPPE DPAALRGAID GLLRSPGLGR ELGRRGREFV CANCCRESLM EELSDALEER FFRRGAPVAV VP
|
| |