| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1922 |
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| Symbol | |
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| ID | 4115538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1942060 |
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| End bp | 1945314 |
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| Gene Length | 3255 bp |
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| Protein Length | 1084 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638036707 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_644681 |
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| Protein GI | 108804744 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.14397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCGGCT TCGCCCACCT GCACGCGAGG AGCGGGTTCT CGTACGGGTT CGGGGTGGCG
ACGCCGGAGG AGCTCGCCGG GGCTGCGGCG AGGATGGGGA TGTGGGCGCT GGCGCTAACG
GACAGGGACG GGCTCTACGG GGTGCCGCGC CTTTTGGCGG CGTGCGAGGG GGCGGGCGTC
TCCCCCATCG TGGGGGCGGA GGTCGGGATG GAGGAAGGCG GACACGTCGT GCTGCTCGCC
GCAGGGATGG AGGGGTACCG GTCGCTCTCG AGGTTGATCA CGGCATACAG GTGCTCTTCG
GAAGACCGGA GGAGACCCGT GTGCCCGCTC CCGGTGCTGC TGGAGCACGC GGAGGGCCTG
GTCTGCCTCA CGGGGGCGGT GCCGTTCGGG CTCCTCCCCC GCCTCGTGCT CTCCGGGCGG
GAGAAGCAGG CGCGGAAGGT AGTGGGCCTG CTGCGCGAGG CGTTCGGGGC GGCGGGGGTG
TTCGCGGAGC TTTCGGACGA CCGGACGGCC GGGAGCCGGA GGAGGATGGC GCGGGTGGCG
GCGTTCGCGC GGGAGTGCGG GCTGCCGGTA GTGGCCACGA ACGAGGCGGC GTACCTCCGC
CCGGAGGACC ACAGGCTGCA CGAGGTGCTG GTAGCGGCCT CGAACCTCAC CCGCCTGCCG
GGGCCGGGGT ACAGGCCGAC GGACCAGCTC TGGCTCAAGC CGCCCGGCGC GATGCGGCGG
CTCTTCGAGG GCTACCCGGA GGCGCTGGCG AACGCGGCGC TCGTGGCGGA GCGGTGCGCG
GGATCGGTGC GGCTCTCGGG GAAGGTCCAC ATGCCCGCGG CGGTCCTGCC CGAAGGGGAG
ACGGCCGAGG GGCGGCTGGC GCGGCTGGTC GGGGAAGGGG CGAGGAGGAG GTACGGGAGG
CCGGGCGATA GGGTGTGGCG GCGGCTGAGG CGGGAGCTGG CCTGTATCGG GGCCTTGGGG
CACGCGGCGT ACTTCCTCAT CGCGCACGAA GCCAAGGAGA TCGCCCGCGA GAGGGGCGTG
CCGGTCTCGG GCCGGGGGTC GGCGGCGAAC TCGATGGTGG CGTACTGCCT GGGCCTCACG
AGCCCGGAGC CTCTCGGCAA CCGGCTCTTG TTCGAGAGGT TCCTCCACGA AGGCAGGAAG
GACCCGCCGG ACATAGACTT GGACCTGGAC TCGGAGCTGC GCGACGGGGT GCGGAACGAG
CTGATGGGAC GGTACGGGCG GCACGGGGCG GCGGTGGCCG CGACGGCGGA GACGATGTCG
CTGCGGGGGG CGGTGAGGGT GGCGGCGCGG GCGCTGGGGC ACCCGCCGGA GGAGATCGAC
CGTCTCAGCC GGCACGTGCC GGCGCGCTTC CGGGACCGCG ACCGGGTGTA CGCGGGAATC
GATGGATGGG AAGAAGCGTT GCGGGAACCC GCGATGCGGG GCCACCCGCT GCGGGACCGG
AGACGGCACC GGCTCCTGCT GGAGCTCTCG GCGCGGCTGT GCGGGAGGCT GTGGCAGGCG
GGGACGCACA ACGGGGGCGT GGTCTTCGGG ACCGCAGAGC GGCACCTCTC GGAGCTCGTG
CCGCTGGAGC CGAGTGGCAA GGAGGGCCTC CTGCGGTGCC AGTACGACAA GGACGACCTG
GAGTACGTCG GGCTGCCGAA ACTGGATTTG CTCGGCCTCA AGATGCACAC GGCGCTGCGG
AAGGCCGGGG AGCTGGCGTC GGCGAGGCTG GGCGAGGAGG TGGACCCGTA CGCGCTGCCG
CCGGGGGACG GGGCGACCTA CGCCCTGATC CGGACGGGCA GGACCGCGGG GATCTTCCAG
CTCGAGTCGC CGGGGCAGAT GAGCCTCTCC ACTCGCCTGA AGCCGCGGCG GTTCCCGGAC
CTGGTGGCGC AGGTGAGCCT GTTCAGGCCG GGGCCGGTCA GGGGCGACCT GGTGACGCCG
TACGTGAACC GCAGGAACGG GAGGGAGCCG TACACGGTGC CCCTGGAGGA GCTGGAGCCG
GTGCTGCGGC CGACCTACGG GGTGATGGTC TTCCAGGAGC AGGTGCTGGA GGTCTGCCAC
AGGGTCGCGG GCTTCTCGCT CGCGGAGGGG GACCTGGTGC GGCGGGCGAT GACGCGGGCC
CGGGGGCCGG GGGCGATGCG GGAGCTGCGG GAGCGGTTCG TGGGGAGCGC CGTCGGGCGG
GGCGTCCCGA GGGAGAAGGC GGAGGAGGTC TTCGAGTGGA TGGAGGGGTT CTCCGTCTAC
GGGTTCTCGG CGGCGCACGG GGCGTCGTTC GCGGAGATCG CCTACGCGAG CGCGTACATG
AGGGTCCACT ACCCGGCGGA GTTCTTCTGC GGCCTGCTGA ACTCGCAGCC GATGGGCTTC
TACAGCCCGC GGGTCTTGCT GAACGAGGCG CGCAGGGCCG GGCTCTCGGT GCTGCCGCCG
GACATCCACC TCTCGGGAGA GGGGTTCACG GTCGAGGGGG ACGGAACGGC CTTGCGGGTG
GGGCTCTCGT ACTGCAAGGG GCTCTCGGAG AGGGCCATTG CCTCCATCGT CTCGGAGCGG
GAGAGGGAGC CCTTCGCCTC GGCGGCGGAC CTGTACCGGA GGACGGCGGT GGAGCGGGAC
TCGCTGCGGG ACATGATCCG GGCGGGGTTC CTGGACGCTC TGGGAGACCG GGGGCGGCTG
CTCGGGGAGG CGGGGCGGCT GCCGGAGAAG CGGCGGCGCG GGGATCAGGA AGAGATACCG
CCCGCGCACC CGGCGAGCTG GTGGGCGGAG CGGGAGACGA GGGGCGGCGG GGACGCGCCC
GTAGGGCTGC CGCTCGCGGA GGACGCGCGG GAGCGGATGG AGTGGGAGGT GCTGGGGCTG
AACGTCCGGC GGCACCCGCT TGAGCCCTAC CGGGCGGCCC TGCGCGAGCT GGGGGTGGTG
CCGAGCGAGG AGGCGAAGGG GCTTGCGCAC GGGAGGAGGG TCCGGGTTGC GGGCCTGATC
GAGTGCCTCC AGCATCCCCC CACCCGCAGC GGGCACCCGG TGTGGTTCCT GCTGATCGAG
GACGAACGGG GGCTGCTGCA GGCCACGGTC TTCCGCAGAG TCTACGGGCG GTACGGGGAC
CTGCTGCACC ACGGGGGCGC GTTCCTGCTG GAGGGGCGGG TGGAGCAGTC GCCGCGCAGG
GGGTTCGCGT TCCTCGTGGA GCGGGTGGAG GACCTGCACG CGAAGCTCTC GGACGTCCGC
GTGCCGGCGC CGAGGGTCGT GCCGGCGCCG GGGGCCTTCG TGCGGGCCGG GCGGCGCGGG
CGGAGGGCGG GATGA
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| Protein sequence | MSGFAHLHAR SGFSYGFGVA TPEELAGAAA RMGMWALALT DRDGLYGVPR LLAACEGAGV
SPIVGAEVGM EEGGHVVLLA AGMEGYRSLS RLITAYRCSS EDRRRPVCPL PVLLEHAEGL
VCLTGAVPFG LLPRLVLSGR EKQARKVVGL LREAFGAAGV FAELSDDRTA GSRRRMARVA
AFARECGLPV VATNEAAYLR PEDHRLHEVL VAASNLTRLP GPGYRPTDQL WLKPPGAMRR
LFEGYPEALA NAALVAERCA GSVRLSGKVH MPAAVLPEGE TAEGRLARLV GEGARRRYGR
PGDRVWRRLR RELACIGALG HAAYFLIAHE AKEIARERGV PVSGRGSAAN SMVAYCLGLT
SPEPLGNRLL FERFLHEGRK DPPDIDLDLD SELRDGVRNE LMGRYGRHGA AVAATAETMS
LRGAVRVAAR ALGHPPEEID RLSRHVPARF RDRDRVYAGI DGWEEALREP AMRGHPLRDR
RRHRLLLELS ARLCGRLWQA GTHNGGVVFG TAERHLSELV PLEPSGKEGL LRCQYDKDDL
EYVGLPKLDL LGLKMHTALR KAGELASARL GEEVDPYALP PGDGATYALI RTGRTAGIFQ
LESPGQMSLS TRLKPRRFPD LVAQVSLFRP GPVRGDLVTP YVNRRNGREP YTVPLEELEP
VLRPTYGVMV FQEQVLEVCH RVAGFSLAEG DLVRRAMTRA RGPGAMRELR ERFVGSAVGR
GVPREKAEEV FEWMEGFSVY GFSAAHGASF AEIAYASAYM RVHYPAEFFC GLLNSQPMGF
YSPRVLLNEA RRAGLSVLPP DIHLSGEGFT VEGDGTALRV GLSYCKGLSE RAIASIVSER
EREPFASAAD LYRRTAVERD SLRDMIRAGF LDALGDRGRL LGEAGRLPEK RRRGDQEEIP
PAHPASWWAE RETRGGGDAP VGLPLAEDAR ERMEWEVLGL NVRRHPLEPY RAALRELGVV
PSEEAKGLAH GRRVRVAGLI ECLQHPPTRS GHPVWFLLIE DERGLLQATV FRRVYGRYGD
LLHHGGAFLL EGRVEQSPRR GFAFLVERVE DLHAKLSDVR VPAPRVVPAP GAFVRAGRRG
RRAG
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