| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1895 |
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| Symbol | |
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| ID | 4115573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | + |
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| Start bp | 1918026 |
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| End bp | 1919750 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638036683 |
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| Product | ABC transporter related |
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| Protein accession | YP_644657 |
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| Protein GI | 108804720 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR01166] cobalt transport protein ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0190897 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCCTCA TAAGGATCGA AAACGTCACG TTCGCTTATT CCAGCCAGCC CGAGGTGCCT
GCCCTCAAGG ACGTGAGCTG CGGCATCGAG CGGGGAAGCT TCGTTGGCAT CACCGGAGTC
ACCGACGCCG GCAAGTCCAG CTTGTGCCGT TTGATCGCCG GCTACGTCCC GCACTTCTTC
GACGGCGAAC TCTCCGGCAG GGTGACGGTA GACGGCATAG ATACCGCCAA GACCACCATC
GGAGAACTCG CGGAGAAGGT GGGTTTCGTC TTCGAAAGCC CCTTCGACCA ACTGACCGGA
GCGAGCTTGA CGGTCACGGA AGAGGTGGCT TTCGCGCTGG AAAACCTCGG CTTTCCCCGA
GAGGAGATAG AGCGTAGGGC AAAAGAGAGT TTGGAACGGG CGGGCATCGC CGATCTGGCC
GACCGCCATC CCCAGCGGCT TTCCGGCGGG CAGTCGCAGC GCCTGGCTCT GGCCTCGGTC
CTCGCGATGC AGCCCGAGAT CCTTGTGCTC GACGAACCCA CCTCGCAGCT GGATCCCCTG
GGCGCCGATG AGGTCTTCGA GGCGGTAAGC GAGATGCACC GCCAGGGTTA CACCGTGGTG
CTGGTGAGTC ACGATCTCGA GCGGTTGGCC GCTCATGCCG ATCGCCTGAT CGTCATGGAG
AACGGCCGCA TCCGGTGGGA CGGAACCCCG CGCGAAGTCC TACTGGACGC CGCGGCGTCC
GGGTACCCTA TCCCAATTCC TGACGTGCTT CGTGTTGGAC AGCGGCTGCG AGAGATCAGG
CGTGTCGATC CGCACGTGCT AATGCCCTTG ACCTTCGAAG AGGCGGCCAC CGAACTAACC
CGCGTGTTCG GCGTTGTTCC CGCCATCTCA CCATTCTCCC CGTCGCCAGC GCAAAAATCA
ATCGGCGATT CGATGGAGAA CAAGCTCCCC AGGCTCCTCT TGGAGGATGT TCACCACACC
TACCCGCGGG AAGTTCATGC CCTCCGGGGG ATTTCGTTGG AATTGGATGA GGGTTGCGTC
TGCATCCTCG GCCAGAACGG AGCGGGAAAG ACGACCCTCG TAAAACACCT CAACGGCCTG
TTGAGGCCGA CCGAAGGACG CGTGCTCATC GAAGGGAAGG ATTCGCGGGA ACACCGGGTT
GCCCAGCTCG CCAAGCACGT CGGGCTGGCC TTCCAGAATC CGGACGACCA GCTGTTCCAC
GGCACGGTAG AGGAGGAGGT GCGTTTCGGC GCCGAAAACG TGGGCGCTAC GCCGGAGCAC
GCCGAACGTT TGACGGAGTC TGCCATCCGG CGCATGGGAC TCAACGAAGT GCGAAAGAAA
AAACCCTACG ACCTGGGGTT GCCCTGGCGC AAGCGCGTCG CCATCGCTTC TGTTCTGACG
ATGGATACGC CGGTGGTCGT CTTGGACGAG CCCACCGGCG GTCAGGATGC GCCGGGGGTG
CAACTGCTGG GCGAGCTGGT CCGGGCCCTG GTGGAAGAAG AAAAGTTGGT CGTGGTGGTC
ACCCACGACG TAGAATTCAC TCGCGAGCAC GCCGATCGCG TGGTGGTGCT CTACCAGGGA
CGGGTGCTCC TGGACGGGGA GCCACGCGAG GTCCTCGGCC AGGAGGAAAC CCTCTCCCGC
ACGCACGTAC GGCCTCCCGC GATTACTCGC CTGGGGAAGC GGCTCGGGCT GGATCGGACG
GTTCTCTCGG TCGACGAGCT CTTCCGATCC CTAAGCTGGG CGTGA
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| Protein sequence | MSLIRIENVT FAYSSQPEVP ALKDVSCGIE RGSFVGITGV TDAGKSSLCR LIAGYVPHFF
DGELSGRVTV DGIDTAKTTI GELAEKVGFV FESPFDQLTG ASLTVTEEVA FALENLGFPR
EEIERRAKES LERAGIADLA DRHPQRLSGG QSQRLALASV LAMQPEILVL DEPTSQLDPL
GADEVFEAVS EMHRQGYTVV LVSHDLERLA AHADRLIVME NGRIRWDGTP REVLLDAAAS
GYPIPIPDVL RVGQRLREIR RVDPHVLMPL TFEEAATELT RVFGVVPAIS PFSPSPAQKS
IGDSMENKLP RLLLEDVHHT YPREVHALRG ISLELDEGCV CILGQNGAGK TTLVKHLNGL
LRPTEGRVLI EGKDSREHRV AQLAKHVGLA FQNPDDQLFH GTVEEEVRFG AENVGATPEH
AERLTESAIR RMGLNEVRKK KPYDLGLPWR KRVAIASVLT MDTPVVVLDE PTGGQDAPGV
QLLGELVRAL VEEEKLVVVV THDVEFTREH ADRVVVLYQG RVLLDGEPRE VLGQEETLSR
THVRPPAITR LGKRLGLDRT VLSVDELFRS LSWA
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