Gene Rxyl_1878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1878 
Symbol 
ID4115556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1905494 
End bp1906885 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content59% 
IMG OID638036666 
Productaspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A 
Protein accessionYP_644640 
Protein GI108804703 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.667499 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACCTCTC CGGCTACATT CTCGGTGGTG GAAGCCGCTC GCCTTATTGC GAGCGGTGAG 
CTCTCCCCCG TTGAACTCAC CCGCTCTATA CTCGAGCGGA TAGAGCGAAT AGACCCACGC
CTCAAGGCGT ACGTAGCCAT TTTTCATGAG GAAGCGCTAG CAGAAGCGAA ACGGGCAGCA
AATGAAATCT CCATGTTGGG ACCGCGTAGT TCGCTGCATG GTATCCCCGT AGCCATCAAG
GACGTTTACG ATATCGAGGG CAAGCCGACG CTGGCCGGCT CTCGCGTTCG GGTGGGCCAC
ATCGCCGATG CCGACAGCGA GGTCGTGAAA CGCCTTCGGG AGGCCGGCGC GATCATCGTT
GGAAAGACGG TGACACACGA GTTCGCCAGC GGGGTTACTT CTCCCCCGAC GCGCAACCCG
TGGGATCTGA ACCGAATACC CGGCGGATCA TCAGGAGGAT CGGGGGCGGC GCTCGCCGCA
GACCTGTGCC TAGCGGCGAC GGGTACTGAC ACGGCAGGTT CAATTCGCAT CCCTGCTTCG
GTGAACGGTG TCGTCGGCCT CAAGCCGACC TTCGGCCGGA TCTCTAAGCG CGGGATCGTA
CCGCTCTCTT GGTCTCTGGA CCACGTAGGA CCCCTTGCCA AGACGGTTCA CGACGCAGCG
CTCATGTTAA ACACCCTAGC CGGCTACGAT CCCGCCGATG TATGCTCGAT TAAAGAACCA
GTCCGCGACT TCACAGATAG GATAGACTGC GAGATCTCTG GCTTCAAGGT TGGCGTAGCC
CAAAACTGGT ATCTGGATCG CATAGGCGCC GCAGTCGCGA AAGCTACGCA AGAGGCAGCA
CGCACCTTCG AAGATCTTGG TGCCTCGGTC GAGGAAATTG AGATCCAGCA TCTCGACCTA
GCAATGGAGA TCCACTCTAC CATCCTCTCC GCTGAGGCAA GTGCATACCA TCAGTCTATG
TTACCTGTCG CGTCCGAGAG CTACAGGCGC GGCACGCGGG TTTTCCTCCA AGCTGGCCAA
CTTATCCCTG CCACGGCCTA TCTCAACGCA CAGCGCGCCC GCGAGCTCAT CCGCCAGGGT
TTCCGCGAAG CGTTTTCCCG AGTCGATGTG CTGATTGGGC CAACGCTACC GACGGTAGCC
GCCCTCTTCG GCAGCAACAA GGTAGAAGTC AACGGAACGG AGGAAGACAT CACGCAAGCT
TACACTCGCC TCTCAATACC CGCCAACCTC GCGGGGCTGC CCGCGCTATC GGTACCGTGC
GGGTACCATT TAGGTCTCCC GCTAGGCCTA CAACTCATAG GAAAACCGCT CGACGAACGA
ACAGTGCTCC GCGCGGGACA CGCATACGAG CAAGCGACAA ACCACCATCT AAAACGTCCA
AATCTCGTTT AA
 
Protein sequence
MTSPATFSVV EAARLIASGE LSPVELTRSI LERIERIDPR LKAYVAIFHE EALAEAKRAA 
NEISMLGPRS SLHGIPVAIK DVYDIEGKPT LAGSRVRVGH IADADSEVVK RLREAGAIIV
GKTVTHEFAS GVTSPPTRNP WDLNRIPGGS SGGSGAALAA DLCLAATGTD TAGSIRIPAS
VNGVVGLKPT FGRISKRGIV PLSWSLDHVG PLAKTVHDAA LMLNTLAGYD PADVCSIKEP
VRDFTDRIDC EISGFKVGVA QNWYLDRIGA AVAKATQEAA RTFEDLGASV EEIEIQHLDL
AMEIHSTILS AEASAYHQSM LPVASESYRR GTRVFLQAGQ LIPATAYLNA QRARELIRQG
FREAFSRVDV LIGPTLPTVA ALFGSNKVEV NGTEEDITQA YTRLSIPANL AGLPALSVPC
GYHLGLPLGL QLIGKPLDER TVLRAGHAYE QATNHHLKRP NLV