Gene Rxyl_1870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1870 
Symbol 
ID4115548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1894762 
End bp1895415 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content61% 
IMG OID638036658 
Productputative cyclase 
Protein accessionYP_644632 
Protein GI108804695 
COG category[R] General function prediction only 
COG ID[COG1878] Predicted metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0124068 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAAGA GACTCCTCGA CCTTACGATG CCGTTTTCGG AAAAGACTAT TCCGGTCCCG 
GGTCATCCGT GTCCGCGACT GGAGCCGCTC ACGACGCTGG AGCGGGACGG CGTACGGAAC
ACAACGATGA CTTTCAGCAT TCACACAGGA ACGCACATAG ACGCGCCGTC TCACTTTATC
AAGGACGGGG CCACCATAGA CGAGGTTCCT ATCGAGAGGT TCCGCCGTCC TGGAGTGCGC
CTGGATCTCA GGGAACTGGC AGAGCCTGGG GCGCCTATCA GCCTGGAGCA CTTGGAGAAG
GCAGGATTCG ATCCCTCGGA AGTGGAGGGT GCGATCCTTA TGCTGGCAAC TGGGTGGTCC
GATCAGGCAT GGGAGAGCGA AAAGCTCTAC GGGGCGAACC CTTATCTGGC CCGGGATGCC
GCGTCTGCGT TGGCAGAGGC GTCGCCGTCC GCACTTGGGT TAGACTTTGC CGTAGACGAC
ACCAAACCGT GGCCCAACCA CACGATCTTG CTAGGCGCGG ACGTACTCCT GATCGAGAAC
CTCATGCGCC TGCCGGATCT CCCAAGAGAC GGGTTCGAGG TGACGGCCTT CCCCTTGAGG
CTCGTCGGGG AGAACGGAGG ACCGACACGT GTCGTCGCGG AGTTGGGACG GTGA
 
Protein sequence
MGKRLLDLTM PFSEKTIPVP GHPCPRLEPL TTLERDGVRN TTMTFSIHTG THIDAPSHFI 
KDGATIDEVP IERFRRPGVR LDLRELAEPG APISLEHLEK AGFDPSEVEG AILMLATGWS
DQAWESEKLY GANPYLARDA ASALAEASPS ALGLDFAVDD TKPWPNHTIL LGADVLLIEN
LMRLPDLPRD GFEVTAFPLR LVGENGGPTR VVAELGR