Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1870 |
Symbol | |
ID | 4115548 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1894762 |
End bp | 1895415 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638036658 |
Product | putative cyclase |
Protein accession | YP_644632 |
Protein GI | 108804695 |
COG category | [R] General function prediction only |
COG ID | [COG1878] Predicted metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0124068 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAAGA GACTCCTCGA CCTTACGATG CCGTTTTCGG AAAAGACTAT TCCGGTCCCG GGTCATCCGT GTCCGCGACT GGAGCCGCTC ACGACGCTGG AGCGGGACGG CGTACGGAAC ACAACGATGA CTTTCAGCAT TCACACAGGA ACGCACATAG ACGCGCCGTC TCACTTTATC AAGGACGGGG CCACCATAGA CGAGGTTCCT ATCGAGAGGT TCCGCCGTCC TGGAGTGCGC CTGGATCTCA GGGAACTGGC AGAGCCTGGG GCGCCTATCA GCCTGGAGCA CTTGGAGAAG GCAGGATTCG ATCCCTCGGA AGTGGAGGGT GCGATCCTTA TGCTGGCAAC TGGGTGGTCC GATCAGGCAT GGGAGAGCGA AAAGCTCTAC GGGGCGAACC CTTATCTGGC CCGGGATGCC GCGTCTGCGT TGGCAGAGGC GTCGCCGTCC GCACTTGGGT TAGACTTTGC CGTAGACGAC ACCAAACCGT GGCCCAACCA CACGATCTTG CTAGGCGCGG ACGTACTCCT GATCGAGAAC CTCATGCGCC TGCCGGATCT CCCAAGAGAC GGGTTCGAGG TGACGGCCTT CCCCTTGAGG CTCGTCGGGG AGAACGGAGG ACCGACACGT GTCGTCGCGG AGTTGGGACG GTGA
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Protein sequence | MGKRLLDLTM PFSEKTIPVP GHPCPRLEPL TTLERDGVRN TTMTFSIHTG THIDAPSHFI KDGATIDEVP IERFRRPGVR LDLRELAEPG APISLEHLEK AGFDPSEVEG AILMLATGWS DQAWESEKLY GANPYLARDA ASALAEASPS ALGLDFAVDD TKPWPNHTIL LGADVLLIEN LMRLPDLPRD GFEVTAFPLR LVGENGGPTR VVAELGR
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