Gene Rxyl_1869 details

Gene Information

• Locus tag: Rxyl_1869
• ID: 4115547
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: -
• Start bp: 1894361
• End bp: 1894765
• Gene Length: 405 bp
• Protein Length: 134 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 638036657
• Product: methylmalonyl-CoA epimerase
• Protein accession: YP_644631
• Protein GI: 108804694
• COG category: [E] Amino acid transport and metabolism; [R] General function prediction only
• COG ID: [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins
• TIGRFAM ID: [TIGR03081] methylmalonyl-CoA epimerase

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.441583
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAATATCC GTCGCGTCAA TCACCTGGGT ATCGTCGTTC ACGACCTCGA TAAGGCGATG 
CGGAGTTTTA CCGATAATCT CGGCCTGGAA CTCGACCACA TCGAGCGGTA TGGGGATGAA 
CTGGACATCG CGTTCCTGCC GTGTGGCGAG ACGCTGGTCG AGCTGATCAA ACCCCTCACG 
GACCGGGGCT TCAACGCCCA CTACCTGCGC CAGCAGGGGC CGGGGATTCA GCACGTTGCC 
TTCGAGGTTG ACGACCTGGA AGCAGCATTG GAGGAGTTGG CAGCGCGCGG CGTGGAGCCG 
ATGGGCGATG CTCCGATGCC CGGAGCAGGC GGCACGCGCA TAGCGTTCCT AGATCCGAAG 
GCTTTCGGTG GGATACTGGT AGAACTCTGC GAGCAGATAT CTTGA 

 

Protein sequence

MNIRRVNHLG IVVHDLDKAM RSFTDNLGLE LDHIERYGDE LDIAFLPCGE TLVELIKPLT 
DRGFNAHYLR QQGPGIQHVA FEVDDLEAAL EELAARGVEP MGDAPMPGAG GTRIAFLDPK 
AFGGILVELC EQIS