Gene Rxyl_1852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1852 
Symbol 
ID4117409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand- 
Start bp1877841 
End bp1878557 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content58% 
IMG OID638036645 
ProductGntR family transcriptional regulator 
Protein accessionYP_644619 
Protein GI108804682 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTGGGGA AAGAGCCACA ATTTAGTCCA GTCGGGACTA AGCGCACGTT CGAGTTGGTA 
CTCGCTCAGA TCAGGGATCG GCTTGAGAGC GGTAGTCTAA AGCCGGGCGA GAAGTTGCCA 
GCGGAGCCGG AGTTGGCTGC TCAGCTTGGC GTCTCGCGTA CCGCCCTTCG TGAAGCGCTG 
AAGGTTCTGG AACTCTCTGG TTATTTGGAG ATTCGCAGGG GTTATGGAGG TGGCACCTTC 
GTAGCGAAGC CGACCGTGGA GGAGTTCAAG GTGATCACCC CCTCCACGAT TCCTATTGCA 
GAGGTCACCC CGCGCCAATT GAGCGAGGTA CGCTTCGCCA TAGAACCGCA AGCGGCCAAG 
ATCGCTGCGC AGGCGGAGAC TCGGGACGTA CGCCAGCTCG AGGACACGGT TAGCGAGATG 
CATATCTTTG ACGATCGTCC AGCGCGCGTT CTGGAGGCCA ACGTCGACTT CCACGTTGCT 
GTAGCCAAGA TCTCTGCCAA CCCCATCTTC GTAACACTGC TCGAGGAGTT GCGTCCTGCC 
GTGTACCGGG AGCTGAACCA CTTGGTGCGC AATTCCGAAT GGCGTGAGAG CTGCCTCAGG 
GGCCACGAGC AGATCATCGA GGCCATTGCG GTCGGAGATT GCGAAGAGGC CGAAAAGATG 
ATGCGCTTGC ACCTCAAGAG CGAGATCAGC GCTGAAGAAT CTGGGAGAGG TAAGTAG
 
Protein sequence
MVGKEPQFSP VGTKRTFELV LAQIRDRLES GSLKPGEKLP AEPELAAQLG VSRTALREAL 
KVLELSGYLE IRRGYGGGTF VAKPTVEEFK VITPSTIPIA EVTPRQLSEV RFAIEPQAAK 
IAAQAETRDV RQLEDTVSEM HIFDDRPARV LEANVDFHVA VAKISANPIF VTLLEELRPA 
VYRELNHLVR NSEWRESCLR GHEQIIEAIA VGDCEEAEKM MRLHLKSEIS AEESGRGK