| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1806 |
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| Symbol | |
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| ID | 4117250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1832373 |
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| End bp | 1834328 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638036603 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_644577 |
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| Protein GI | 108804640 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.266956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGTGT TCGCCACGAT CCTGTTCGGC GCGCTCTCGG CCGAGGATCC GGACGTCGAG
AAGCTCGACT CGCAGGAGTT CCAGCGGGCC GTGGAGGAGA GGGCTTTCGC CCTGGGTCCC
GAAGATCACG CGCCCGCCGG CGGCGAGGGC CAGGGCGCAG CCGGCCACCG CGAGCTCCGG
CATCCTGTGG GGAGAGCGCC GTCCGGAGGC GCCGGTTCCG ATCTGGAGCC GGGGCCGCTC
AAGGTCTACG ACGAGAGCCA GAAGGTCACC GGTCTGCTCA AGCCGGAGGG TGGGGGAGAG
CCGCGGGAGT TCGAGTACTC TTACCCCGAG GGCTACGACA TAGCCCGGGT GCTGAACGAG
GCCAACATCC CCTTCACCAC CGACCCGCAG ACCGCGGGCC CCTGGGCCAG AGCGATCGCT
GTCATGGCCC CCTTCGTCCT GATCCTCTTG CTCTTCTTTT TGATGACGAG GACGGGACGC
AGCGCCAGCC AGAGCAGCAG GATGACCGAC TTCGGCAAGA GCCGGGCGCG CAGGATGACC
AAGGACCAGC CCAAGGTGAC CTTCGCCGAC GTTGCGGGGG CGGACGAGGC GGTGCAGGAG
CTCACCGAGA TAAAGGAGTT TCTGGAGAAC CCGCAGAAAT TCCAGAAGCT GGGGGCCAGG
ATACCGAAGG GGGCGCTCCT GGTGGGGCCT CCGGGGACGG GCAAGACCTT GCTTGCGCGG
GCGGTGGCCG GGGAGGCGGG GGTACCGTTC TTCTCCATTT CGGGCTCTGA CTTTGTGGAG
ATGTTCGTTG GGGTTGGGGC CTCGAGGGTG CGCGACCTCT TCGAGCAGGC CAAGCAGAAC
AGCCCGTGCA TCATCTTTGT GGACGAGATA GACGCGGTGG GGCGCCAGAG GGGGGCTGGG
CTTGGCGGCG GCCACGACGA GCGGGAGCAG ACCCTGAACC AGCTGTTGGT GGAGATGGAC
GGCTTTGACT CAAAGAGCGG GATCATCATG CTCGCCGCCA CAAACCGCCC CGACATCCTC
GACCCGGCGC TCTTGAGGCC CGGGCGCTTT GACCGGCAGA TAGTGGTCGA CCGGCCCGAT
CTTCCGGGCA GGATCAAGAT CCTCAAGGTC CACACCCGGG GCAAGCCGCT TGGGGAGGAC
GTGGACATAG AGACCATAGC CAGGGGCACG CCGGGCTTCA CGGGGGCGGA CCTTGCCAAC
CTGGTCAACG AGGCGGCGCT GCTTGCTGCG CGGCACAACA AAGAGCAGAT CGAGATGGCC
GAGATGGAGG AGGCCATAGA CCGGGTCATT GCCGGTCCCG AGCGCAAGAC CCGCCTGATA
AGCGAGAAGG AGAAGGAGAT CACCGCCTAC CACGAGGCGG GCCACGCCAT AGTGGGGGCG
CTCCTGCCCG AGGCCGACCC CGTGCACAAG GTGACCATCA TCCCGAGAGG GCAGGCCCTT
GGGGTGACCA TGAGCCTGCC GGAGGAAGAC CGCTTCATGA TGAGCCGGGC GCAGCTGATG
GCCCAGCTCT CCTACATGCT GGGGGGCAGG GCGGCCGAGC GGGTGGTCTT CGAGGAGATC
ACCACCGGCG CCTCAAACGA CATAGAGCGG GCCACCAAGG TTGCCCGGCA GATGGTCACC
CGCTACGGGA TGAGCGAGAA GCTGGGGCTC ATAGCGCTTG GCCAGCACGA CGGGCAGGTG
TTCATGGGGC GCGACCTGCA CGCCCAGCCC GACTACTCCG ACGAGATCGC CTTCCAGATA
GACAAGGAGA TAAGGCGGCT GGTGGACGAG GCCTACGACA CCGCGGAGGA TCTGCTGGTG
CGCAACCGGC GGCTGCTGGA GAAGCTTGCC TCTGACCTCA TCGAGTACGA AACCGTCGAC
GCCGAGCACC TGCGCCGGCT GGTGGAGGAG TACGCGGTGG ATGAGCATCC CTCCCGCGGG
CGACCGGCCA TGTCGGTCAA CGGCCACCGG GGGTGA
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| Protein sequence | MIVFATILFG ALSAEDPDVE KLDSQEFQRA VEERAFALGP EDHAPAGGEG QGAAGHRELR
HPVGRAPSGG AGSDLEPGPL KVYDESQKVT GLLKPEGGGE PREFEYSYPE GYDIARVLNE
ANIPFTTDPQ TAGPWARAIA VMAPFVLILL LFFLMTRTGR SASQSSRMTD FGKSRARRMT
KDQPKVTFAD VAGADEAVQE LTEIKEFLEN PQKFQKLGAR IPKGALLVGP PGTGKTLLAR
AVAGEAGVPF FSISGSDFVE MFVGVGASRV RDLFEQAKQN SPCIIFVDEI DAVGRQRGAG
LGGGHDEREQ TLNQLLVEMD GFDSKSGIIM LAATNRPDIL DPALLRPGRF DRQIVVDRPD
LPGRIKILKV HTRGKPLGED VDIETIARGT PGFTGADLAN LVNEAALLAA RHNKEQIEMA
EMEEAIDRVI AGPERKTRLI SEKEKEITAY HEAGHAIVGA LLPEADPVHK VTIIPRGQAL
GVTMSLPEED RFMMSRAQLM AQLSYMLGGR AAERVVFEEI TTGASNDIER ATKVARQMVT
RYGMSEKLGL IALGQHDGQV FMGRDLHAQP DYSDEIAFQI DKEIRRLVDE AYDTAEDLLV
RNRRLLEKLA SDLIEYETVD AEHLRRLVEE YAVDEHPSRG RPAMSVNGHR G
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