| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1805 |
|---|
| Symbol | |
|---|
| ID | 4117249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1830667 |
|---|
| End bp | 1832241 |
|---|
| Gene Length | 1575 bp |
|---|
| Protein Length | 524 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638036602 |
|---|
| Product | metal dependent phosphohydrolase |
|---|
| Protein accession | YP_644576 |
|---|
| Protein GI | 108804639 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1480] Predicted membrane-associated HD superfamily hydrolase |
|---|
| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.155287 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGGAC TCCACCGTAC GCCGGCGCGT TTCGGGCGTC TTGGGGGGTG GGTCGAGGGC
CTGCCGGAGG TGCGGTTGTA CGCCGCGCTC GCCCTCACGA GCTGGGTCTC GCTCACGCTC
CTGGTCGGGC TGGGTTCGGG GGCGCCGGTG GAGCGCGCGA TCGTGCAGGG CTTCGTCGAG
CAGGAGGCCC TGTCGGACCT GGGGTCTCCG AACCTGCCGC ACCAGACCAG CCCCTGGACG
GCGCTGCTCG GCGTAGCGCT CGTGGTGGCG GTGGAGATGG GGATGGCCTG GTACTTTCTG
CGACGCTTCG GGGCCCGCAT CTTCAAGGAC AACGCGGCCA CCCGGCTGGT GCTGACGGCC
TCGCTGATGA TCCTGTTCAC CGCGCTGGCC CGTCTCTTTC TGGAGCTGGG CCTCGACCCG
TACCTGACGC CGCTCGCGGG CCTCTCGATC ATCGGGACGA TGCTGCTCGG CCCGCGGCTC
ACGTTCCTGA TGGCCGTCAT GGCCAGCGTG AACGTAGGGA TCATGGGCGG CAACGACTTC
CTGCTCTCCT CGGCCCTGCT GCTCGTCTCC GGCTTCGCCG TCTACGCCGT CGTGCGGGTC
GGCTCGCGCC AGCAGTTGCT CGGGGCGGGC CTGGTCGTCG CCGGCGCCAT GGCCGCCGTG
GCGTTCGCGG TGGGTTTGAT CGGGGGAGCG AGCTTCCCCG CCGCCCTGTG GCTGGGCGCC
CTCGGGTTCG GCAACGGCCT GCTCTCGCTG GGGCTGGCGC TGGTGCTGCT GCCGCTTCTG
GAGGACGCCT TCAACGTCCT CACCCCCATG AAGCTGCTGG AGATCTCTGA CCCGGGAACG
CCCCTGATGA TGCGCTTGCT GGAGAGAGCG CCGGGCACCT TCACGCACTC CATACTGGTA
GGCGTCCTCG CCGAGAACGC GGCCGAGCGC ATCGGGGCCA ACGCCATGCT CGCGCGGGGA
GGGGGCTACT ATCACGACAT CGGCAAGATG GAGCACCCGG CGTATTTCAT AGAGAACCAG
ATCGCCCGCG CGAACCCGCA CGCCAACCTC TCCCCGGCCC TCTCGGCCAG GATCATAAAG
CGCCACGTCG AGGACGGGCT AAAGATCGGG CGCGCCTGGG GGCTGCCGCA GGAGATCCTG
GACATCATAG CCCAGCACCA CGGCACCACC CGCATCGAGT ACTTCTACCG CAAGGCGCTC
GAGGAGAGCG CGGAGGTCGG CGAGGCGGAC TTCCGCTACA ACACCGGGCT GCCGAGGTCC
AAGGAGGCCG GCATCGTGAT GCTCGCCGAC TCCGTGGAGG CAACCGTGAA GGCGCTCTCC
AAGCCGACGC CCGAGCGCGT CGAGGACGTG GTCCGGGAGA CGATCAAGCG CAAGCTGGAC
GACGGGCAGC TCGACGCGTG CGAGCTGACG GTGCGCGAGA TCCACCAGGT GGGCGACGCG
ATCCGGGAGG CCCTCACCGG CTTCCTCGGC CCCCGCATCC AGTACCCCGA CGGCTCGCGC
GACCCGAACG GCGCCCGTCC CAAGGGCGGC CAGACGGCGA AACCGGCGAC CCGGACCTCG
GGAGAGCCCG GCTGA
|
|---|
| Protein sequence | MPGLHRTPAR FGRLGGWVEG LPEVRLYAAL ALTSWVSLTL LVGLGSGAPV ERAIVQGFVE
QEALSDLGSP NLPHQTSPWT ALLGVALVVA VEMGMAWYFL RRFGARIFKD NAATRLVLTA
SLMILFTALA RLFLELGLDP YLTPLAGLSI IGTMLLGPRL TFLMAVMASV NVGIMGGNDF
LLSSALLLVS GFAVYAVVRV GSRQQLLGAG LVVAGAMAAV AFAVGLIGGA SFPAALWLGA
LGFGNGLLSL GLALVLLPLL EDAFNVLTPM KLLEISDPGT PLMMRLLERA PGTFTHSILV
GVLAENAAER IGANAMLARG GGYYHDIGKM EHPAYFIENQ IARANPHANL SPALSARIIK
RHVEDGLKIG RAWGLPQEIL DIIAQHHGTT RIEYFYRKAL EESAEVGEAD FRYNTGLPRS
KEAGIVMLAD SVEATVKALS KPTPERVEDV VRETIKRKLD DGQLDACELT VREIHQVGDA
IREALTGFLG PRIQYPDGSR DPNGARPKGG QTAKPATRTS GEPG
|
|---|
| |