| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1778 |
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| Symbol | |
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| ID | 4117573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1802591 |
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| End bp | 1803949 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638036575 |
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| Product | major facilitator transporter |
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| Protein accession | YP_644549 |
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| Protein GI | 108804612 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATGGGCA GCGCAGAGAA GAAAGGGGCG GCGGGGGACT CCTCCGTCCG CCGGGTGGCC
CTGGCCAGCG CGGTGGGGGC CACCATCGAG TGGTATGACT TCTTCCTGTA CGGGACGGCC
GCCGGGCTGG TCTTCAACCG GCTCTTCTTC CCGGAGGGGA ACCCCACCGC GGGGACGCTC
GCGGCCTACG CCACCTTCGC GGCGGGCTTC GTGGCGCGCC CCGTAGGGGG GCTCGTCTTC
GGGCACTTCG GCGACCGCAT CGGGCGCAAG CGGATGCTGG TGCTTACGCT CCTCGTCATG
GGGGTCGCCA CCTTCCTCAT CGGGCTTCTG CCGACCTACG GGCAGGTGGG GCTCTGGGCC
CCGGCGCTGC TGCTCGCCCT GCGGGTGGTG CAGGGGATAG GGCTCGGGGG CGAGTGGGGC
GGGGCGGTCT TGATGGCCGT CGAGCACGCG CCCCGCGTGC GGCGCGGCTT CTACGGGAGC
TGGCCGCAGG TGGGGGTGCC GGCGGGGCTC TTGCTCGGCA CCTCGGCCTT CACCCTGCTC
TCGGTGTCCC TCACGGAGGA GCAGTTCCTC GGCTGGGGCT GGAGGCTGGC GTTTCTCTTC
AGCGCCGTGC TGGTCGCCGT CGGGGCGTAC ATCCGGCTGC AGGTGCTGGA GAGCCCGGCC
TTCCTCAGGC TGAGCGAGGC GCGGCAGGAG GCGCGGGTCC CCTTTCTGGA GCTCCTCCGG
ACCCACCCGC GGGAGCTTCT GCTCGGCGTG GGCACCCGGT TCGCCGAGGG CGTCTCCTTC
AACATCTACG GCGCCTTCGT CATCTCCTAC CTCGCGGGCG CGCTCGGCAT GAGCCGCCCG
GCGGCGCTGC TGTGCGTCTC GGTGGCCGCG GTGCTCAACT GCGCGCTCAC GCCCCTCTGC
GGCGCGCTCT CGGACCGCGT GGGGCGGCGC CCGGTCTTCG GGGCGGGGGC CGGTCTCTTC
GGGCTCTTCG CCCTCCCCTC CTTTCTGCTG CTCGGCACCG GGCGGGTGGC GCCCGCCATG
CTCGCGCTGG TCGTGGCGTT CGGGCTCGTC CACCCCATGA TGGAGGCCAC CCTCGCCTCC
TTCTGGTCCG AGCTCTTCGA GACGCGGGTG CGCTACAGCG GCCTCTCGTT CGTCTACCAG
TTCTCCGGGA TCTTCGCCAG CGGCATGACC CCGCTGGTGG CCACGTGGCT GCTCTCGGAG
GGCGGCGGGA GGCCCTGGCT GCTCGCGGGC TACATGGCCG GGGCGGCGCT GCTGAGCGTG
ATCTGCGTGC TCGCCCTGCG GGAGACCTGC GGTACGGACA TCTTCCCCGA GGCCGAGAAG
ACGGCCCGGC TGCGCGCCGG GGCGCGTCCC GTCAGATGA
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| Protein sequence | MMGSAEKKGA AGDSSVRRVA LASAVGATIE WYDFFLYGTA AGLVFNRLFF PEGNPTAGTL
AAYATFAAGF VARPVGGLVF GHFGDRIGRK RMLVLTLLVM GVATFLIGLL PTYGQVGLWA
PALLLALRVV QGIGLGGEWG GAVLMAVEHA PRVRRGFYGS WPQVGVPAGL LLGTSAFTLL
SVSLTEEQFL GWGWRLAFLF SAVLVAVGAY IRLQVLESPA FLRLSEARQE ARVPFLELLR
THPRELLLGV GTRFAEGVSF NIYGAFVISY LAGALGMSRP AALLCVSVAA VLNCALTPLC
GALSDRVGRR PVFGAGAGLF GLFALPSFLL LGTGRVAPAM LALVVAFGLV HPMMEATLAS
FWSELFETRV RYSGLSFVYQ FSGIFASGMT PLVATWLLSE GGGRPWLLAG YMAGAALLSV
ICVLALRETC GTDIFPEAEK TARLRAGARP VR
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