| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1735 |
|---|
| Symbol | |
|---|
| ID | 4116635 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1764855 |
|---|
| End bp | 1765115 |
|---|
| Gene Length | 261 bp |
|---|
| Protein Length | 86 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638036533 |
|---|
| Product | HPrNtr domain-containing protein |
|---|
| Protein accession | YP_644507 |
|---|
| Protein GI | 108804570 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
|---|
| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00241683 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGAAC GCGAAGCCAC GGTGGTGCCC GAGGAGGGGC TGCACGCCAG GCCTGCGGCC
AGGTTCGTGG GGACGGCCAA GCAGTTCGTC TCGGACATCG TGGTCATAAA GGACGGCAAG
GAGGCCAACG CCAAGAGCCC GCTGAAGCTC ATGACCCTCG GGGCGAAGAA GGGCGACCGG
GTGGTGATCC GGGCCGAGGG CGAGGACGCG GAGGAGGCCG TCGAGGCGCT GGTTGAGATC
GTGACCTCGG AGGAGCCCTA G
|
|---|
| Protein sequence | MVEREATVVP EEGLHARPAA RFVGTAKQFV SDIVVIKDGK EANAKSPLKL MTLGAKKGDR
VVIRAEGEDA EEAVEALVEI VTSEEP
|
|---|
| |