| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1733 |
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| Symbol | |
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| ID | 4116633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1761645 |
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| End bp | 1763135 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638036531 |
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| Product | phosphotransferase system, N-acetylglucosamine-specific IIBC component |
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| Protein accession | YP_644505 |
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| Protein GI | 108804568 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1263] Phosphotransferase system IIC components, glucose/maltose/N-acetylglucosamine-specific
[COG1264] Phosphotransferase system IIB components |
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| TIGRFAM ID | [TIGR00826] PTS system, glucose-like IIB component
[TIGR01998] PTS system, N-acetylglucosamine-specific IIBC component |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0937959 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCACGA CGGCGGCGCG GGGCATTGGT TGGGAGCGGG CGCTTGGGGC GCTGCAGAGC
CTGGGGCGTT CGCTGATGCT TCCGATCGCG GTGCTTCCGG CGGCGGCGCT GTTGCTGAGG
CTGGGGCAGC AGGATCTGTT GGACCTCCCC TGGATGGCGG CTGCCGGGCA GGCCATCTTC
GACAACCTCT CCATGATCTT CGCCGTGGGC ATAGCCTTCG GTCTGGCGGG GGGAGACGGG
GCGGCTGCGC TCGCCGGGCT GGTCGGGTTT CTGGTGTTCG ACGGGGTGTT CAAGGCTGTC
ATCCCGCAGG TGGACGGGGA GCCGGACCCC AACATAAACA TGGGGGTGCT CTCCGGCATC
ATCGTCGGGC TCGTGGCGGC GGGGCTCTAC AGGCGGTTCC ACGACATACG CCTGCCGGAC
TACCTGGCCT TCTTCGGCGG GCGGCGCTTC GTGCCCATAG TGACCGCCCT TGCAGCCCTG
GTGCTGGGGG CGATCTTCGG TCTGGTCTGG CCGCCGGTGC AGGAGGTCGT GAACGCCGCC
GGCCAGGCCA TCGTCGGGCT TGGGGCTGTG GGAACCGGGA TCTACGGCTT CCTCAACCGG
CTCCTCATCC CGGTGGGGCT GCACCACGTC CTGAACACCT ACGTCTGGTT CCAGCTCGGC
ACCTACCAGG GGCCGGACGG GACGGTGCAC GGGGATCTCA CCCGGTACTT CGCGGGGGAC
CCCACCGCGG GGTTCTTCAT GTCGGGCTTC TTCCTGGTCA TGATGTTCGG GCTCCCCGGG
GCCTGCCTCG CCATGATCGT GCACGCCCGC TACCGCAAGG TGGCGGTAGG CATACTCGGC
TCGGCCGCCT TCGCCTCCTT CCTCACCGGC ATCACCGAGC CCATAGAGTT CGCCTTCCTC
TTCGTCGCGC CGCTGCTCTA CCTGGTGCAC GCGGTGCTCA CCGGGCTCGC CCTCGCCATC
GCCACCCTGA TGAACATCAA GATAGGCTTC GGGTTCTCCG CCGGGGCCAT CGACTACTTC
CTGAACTTCA CCAAGGAGAA CACCACCGGG GAAGGTTGGA TCTGGGTTCT CGGCGCCGTC
TACTTCGCCG TCTACTACGC CGTCTTCAGC TTCTTCATAA AGCGGTTCGA CCTCGCCACC
CCCGGGCGCG GGGAGGCCGC CACCGGGCTC TCGGCCGACT GGATCCTCCC GGAGAGCCAG
CGCGGCCCCC GTCCGGAGGC GAAGGGGCGG GAGCCCGCCG GGGAGGATCG CGAGGACGCC
CTCGCCCGCA GCGTGGTCGA TGCGCTCGGC GGCCGCCAGA ACATAGAGAG CTGCGAGGGC
TGCATTACCC GCCTGCGCCT CTTCGTCGGG GACCCGGAAC GGATCGACGA GGCCCGGCTG
CGGGAGCTCG GGGCCTCCGG GGTCGTGAAG CGCGGCAAGG TGGTCCAGGT GGTCATGGGC
ACACAATCCG ACCGGATCGC CGAGCGGGTG AACCGGCTGA GGAAGGGCTA G
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| Protein sequence | MSTTAARGIG WERALGALQS LGRSLMLPIA VLPAAALLLR LGQQDLLDLP WMAAAGQAIF
DNLSMIFAVG IAFGLAGGDG AAALAGLVGF LVFDGVFKAV IPQVDGEPDP NINMGVLSGI
IVGLVAAGLY RRFHDIRLPD YLAFFGGRRF VPIVTALAAL VLGAIFGLVW PPVQEVVNAA
GQAIVGLGAV GTGIYGFLNR LLIPVGLHHV LNTYVWFQLG TYQGPDGTVH GDLTRYFAGD
PTAGFFMSGF FLVMMFGLPG ACLAMIVHAR YRKVAVGILG SAAFASFLTG ITEPIEFAFL
FVAPLLYLVH AVLTGLALAI ATLMNIKIGF GFSAGAIDYF LNFTKENTTG EGWIWVLGAV
YFAVYYAVFS FFIKRFDLAT PGRGEAATGL SADWILPESQ RGPRPEAKGR EPAGEDREDA
LARSVVDALG GRQNIESCEG CITRLRLFVG DPERIDEARL RELGASGVVK RGKVVQVVMG
TQSDRIAERV NRLRKG
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