Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1720 |
Symbol | |
ID | 4116503 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1748408 |
End bp | 1749430 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638036518 |
Product | inner-membrane translocator |
Protein accession | YP_644492 |
Protein GI | 108804555 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0384708 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGCAAG CTACAGTAGG CGAGCGCGTG CGGGAGGTGG GGTTCCTGCG CAGGCAGCTC ACCCGCCCGG AGCTCGCCGC GATCGCCGGC GCTATACTGG TCTTCGCGTT CTTCGCGATC ACGGCGGGGG ACCAGGGGTT CCTGACCTTC GGCGGCACGA TCAGCTACCT GCAGGTCGCC GCGCAGCTCG GGATCGTCGC GGTGCCGGTG GCGATGCTGA TGATCGCCGG GGAGTTTGAC CTCTCCGTGG GCTCGATGGT AGGGGCGGCG GGGATCATCA TCGCCATCAC CGTTACGCAG TACGGCTGGC CGCTGTTTGC CGGGGTGCTC CTGGCGTGCG CGGTGGCGCT CCTCGTCGGG TTTTTCAACG GCTACCTGGT GATAAAGACC GGGCTGCCGT CGTTTATCGT GACGCTCGCG ATGCTCTTCG CGCTCAGGGG TCTCACCATC GGGTTCTCGC GCCTGATCAC GGGCCGCACA CAGATCGGCG GCCTCAGCGA CGCCACCCAG GGAGACGTCC TCTTCCCCAT CTTCGCCGGT GAGATAGCCG GGATACCCGT CTCGGTCTTC TGGTGGATCG GACTCGCCAT ACTCGGCACT TGGGTGCTGC AGCGGACGGC GTTCGGGAAC TGGATCTTCG GGAGCGGCGG GGACCCGGTC GCCGCGCGCA ACGTCGGGGT GCCGGTGAAC CGCGTGAAGA TCATACTCTT TATGTGCACC GCGCTCTCGG CGGCCCTCCT GGCGACGATC CAGGTGATGG ACGCGGGCTC GGCGGACGTG CTGCGCGGCG AGCTGCTGGA GCTTCAGGCG ATAGCCGCCT CGGTCATCGG CGGGGTCCTC CTCACCGGCG GCTACGGCTC GGTCGTCGGG GCTGTCTTCG GGGCGCTCAT CTTCGGGATG GTGCAGCAGG GCATCTTCTT CACCGGGGTC AACACCGACT GGTTCCTGGT CTTCGTCGGG GTGATGCTCC TCGTCGCCGT CCTGTTCAAC AACGTGATCC GCAACCGCGC ATCTAAGGGG TAG
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Protein sequence | MAQATVGERV REVGFLRRQL TRPELAAIAG AILVFAFFAI TAGDQGFLTF GGTISYLQVA AQLGIVAVPV AMLMIAGEFD LSVGSMVGAA GIIIAITVTQ YGWPLFAGVL LACAVALLVG FFNGYLVIKT GLPSFIVTLA MLFALRGLTI GFSRLITGRT QIGGLSDATQ GDVLFPIFAG EIAGIPVSVF WWIGLAILGT WVLQRTAFGN WIFGSGGDPV AARNVGVPVN RVKIILFMCT ALSAALLATI QVMDAGSADV LRGELLELQA IAASVIGGVL LTGGYGSVVG AVFGALIFGM VQQGIFFTGV NTDWFLVFVG VMLLVAVLFN NVIRNRASKG
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