Gene Rxyl_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1712 
Symbol 
ID4116495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1738737 
End bp1740467 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content74% 
IMG OID638036510 
Productbeta-lactamase 
Protein accessionYP_644484 
Protein GI108804547 
COG category[V] Defense mechanisms 
COG ID[COG2367] Beta-lactamase class A 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGCCA GAGAGCGGGC GAGCTTCCGG AAGCGAAGGA TCCGGCGCAG GAGGGCCCGG 
GCCCTCCTGG CGCTGTTCGT GGCGGCAACC GCCGCGGCGC TGGCCTGGCG GGGCCTCCCC
GCGCTGGAGG GGCCGGCCGG CCCCGGCGAG GGACAGGCCC CCGTGCCGCA GCGGGTCGGG
GCGGCCCGGG AACCCTCGGC CTCGCCGCTC GGGGCCCCGG ACCCGCCGGA GCTCACCCTC
GCGGGCCACG CCTACGAGGC CGTCGCGGGG GAGCTGCCCG GGGTACGCCC CAGGGACGTG
GGCGGGGTGC ACCAGAGCGT GCTGGACCCC TCCTGGGCCT CGGCGCGCAT CGAGCCCCCC
GGCCTGAAGG GCGGACGCTA CTACGCCGTC TTCCTGCGCC GGGAGGGAGG TTCCTGGCGC
GCCGAGCGCT CCGTCCTCAT CGAGGACCAG GCCCACCCCA AAGACGTGAA GACGCTGCTC
GGCGGGGTCC CGGAGGACCT GGTCTCCCCC CTCTTCCCGC GGGAGAGGCC GGCCCGGGCG
GGCTCCCCCG CCGCCCGCGC CGTGCAGGAG GTGGAGCGCG CCACCGGCCG CGAGGGGTGG
GAGGCCGGGG AGGTGAAGAG CAGCGGCCCC TACCACCGGG TCCGGGTCCA GAAGGAGGGG
GGCGGAGAAG AAGCCTGGAC GTACGTCTAC CTGCGGGGGG AACAGCTCGC CGCCGCCGGG
CGAGAGATCA CCTCCGCCGA GCTCCCCGGC TTCCCGCGCG GGCTGGTGGA GGAGGGCGGG
ATGGCCTCCC CCGAGCCCTC CCGCATCCCG CCTCCGGACC CCGTCGCCCA AGACCTCCCG
GAGGGGGAGT ACAGGGAGAG GGTCGAGCGC GCCCTCGAGG AGGCGGCCGG GGTCGTGCGC
GAGCACCCCG GCGTCGCCGG GTTCTACGTC CGGGACCTCA AGAGCGGCGC CGGGTACGGC
GTCCGGCCCG ACCAGGTCTT CTTCTCGGCC TCCACCATCA AGGTGCCCGT CATGATCGCC
GTCTACCGCA GGATAGACCA GGGAAGGCTC CACTACTCCG ACAGGATCGT CACCACCGAG
GAGGACTGGG CCGCCGGGGC CGGGTGGCTC CGCTGGCAGA CCCCCGGGGC AAGGAGCACC
GTCGAGGACG CCCTGTGGCT CATGATCGCC CAGTCCGACA ACGTGGCCAC CAACGCCCTC
GTGCGGCTGG TCGGCGGCCC CGGCTACGTC AACGAGGTCG CCAGGTCCCT CGGCGCCGAA
GACACCGCGC TCCACTGGAA GCTCAGCAGC GAGCGCGCCG CCGTCCCCAG CCTGGACAAC
CGCACCACCC CGAGGGACAT GGCGCTGCTG CTAGCCAAGA TACGCTCCGG GGAGGCCGCG
AGCCGCTACG CCTGCCGCGA GATGCTGGGC CTGCTCGAGC AGAACAACCT GGAGTGGTGG
ATAGAGGGCG GCGTCCCCCC GGGCGTGAAG GTGGCGAACA AGGGCGGCTG GCTGGACTCC
ACCTACAACG ACGCGGGCAT CGTGGAGTAC GAGGAGCGGC CCTACGTGCT CGCCGTCTTC
ACCGAGTACG GGCCGGGGCT CGGCGAGGGC GGGAGGTACC TGCAGAGGAT CTCGCGGGCC
GTCTGGCTCG CGCAGAGCGG GAAGACCCTC GAGGAGTACG GCAGGGAGCA GGAAAAGGGC
GAGACGACCG CTAGCGGGCG GCCGTCGAGC TCCGGGGCAC CATCACCCTG A
 
Protein sequence
MGARERASFR KRRIRRRRAR ALLALFVAAT AAALAWRGLP ALEGPAGPGE GQAPVPQRVG 
AAREPSASPL GAPDPPELTL AGHAYEAVAG ELPGVRPRDV GGVHQSVLDP SWASARIEPP
GLKGGRYYAV FLRREGGSWR AERSVLIEDQ AHPKDVKTLL GGVPEDLVSP LFPRERPARA
GSPAARAVQE VERATGREGW EAGEVKSSGP YHRVRVQKEG GGEEAWTYVY LRGEQLAAAG
REITSAELPG FPRGLVEEGG MASPEPSRIP PPDPVAQDLP EGEYRERVER ALEEAAGVVR
EHPGVAGFYV RDLKSGAGYG VRPDQVFFSA STIKVPVMIA VYRRIDQGRL HYSDRIVTTE
EDWAAGAGWL RWQTPGARST VEDALWLMIA QSDNVATNAL VRLVGGPGYV NEVARSLGAE
DTALHWKLSS ERAAVPSLDN RTTPRDMALL LAKIRSGEAA SRYACREMLG LLEQNNLEWW
IEGGVPPGVK VANKGGWLDS TYNDAGIVEY EERPYVLAVF TEYGPGLGEG GRYLQRISRA
VWLAQSGKTL EEYGREQEKG ETTASGRPSS SGAPSP