| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1701 |
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| Symbol | |
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| ID | 4116484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1725000 |
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| End bp | 1726520 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638036499 |
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| Product | amidase |
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| Protein accession | YP_644473 |
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| Protein GI | 108804536 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0537523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGAGGG TTCCCGATCC CGGCAGGCTC GTGGAGATCG CCCGCAGCTC CTTCGGGCTG
CGGCTCGGGG AGGAGGAGGC GCGCTCGTTC GCCGGCCTCA TGGAGGCCTC CATCGCCTCC
TACCGGCGGC TGGACCAGCT GGCCGAGCCC TCCCTCCCGG TGAAGTACCC GCGCACCGGC
GGGCGCCGGC CCGAGCCCGA GGAGAACCCC CTCAACGCCT GGTACTACCG CTGCTCCATA
AAGGGCGCGG GGGAGGGGCC GCTCGCGGGC AAGCGGGTGG CCGTGAAGGA CAACGTCGCG
GTCGCCGGGG TGCCGATGAT GAACGGTTCG GCCACCCTCG AGGGCTACGT GCCCGAGTTC
GACGCCACCA TCGTCACCCG CATCCTCGAC GCTGGAGGCG AGATCTCGGG CAAGGCCGTC
TGCGAGCACC TGTGCTTCTC GGGCGGCAGC CACACCTCCG ACACCGGCCC CGTGCTCAAC
CCTCACGACC GCACGCGCTC GGCCGGGGGC TCCTCCAGCG GCAGCGCGGC GCTGGTGGCC
GCGGGGGAGG TGGAGATGGC CATCGGCGGG GACCAGGGCG GCTCCATCCG CATCCCCTCC
TGCTGGTGCG GGACCTACGG CCTCAAGCCC ACCTACGGGC TCGTCCCCTA CACCGGCGTC
TTCCCCATAG AGCTCACCCT CGACCACGTC GGGCCAATCG CCGCGAGCGT CTCCGACGTG
GCGCTGCTGC TCTCGGCGAT AGCCGGGGAG GACGGGCTCG ACCCGCGCCA GAGGGAGGTG
CGGGTCGGGG ACTACCAGAA CGCGCTCGAG CGGGGCGTGG AGGGGGTGAG GATAGGCGTC
GTCGCGGAGG GTTTCTCCCT GCCCTCCCTC TCCGAGGAGG ACGTGGACGA GACCGTGCGG
CGGGCCGCGG ACACCTTCCG GGAGCTCGGG GCGGAGGTGC AGGAGGTCTC CATCCCCCTG
CACCGCGACG GGATCCACAT CTGGAACGCC ATAGCCATCG AGGGGGCCAC CGAGCTCATG
GTGCGCGGCA ACGGCATGGG GACGAACTGG GAGGGGCACT ACTCCACCTC GCTGCTCGAC
GCCTACTGGC GGGGCCGCAC CGCGCTCGCC GGCGAGCTCT CCGAGACCGT AAAGCTCACC
ATGCTCACCG GGCAGTACAT GCGCGAGGCC TACGGCGGCC GCTACTACGC CAGGGCCCGG
AACCTCGCCC GCCGGCTGCG GGCGGCCTAC GACGCGGCGC TGGAGCGGGC GGACCTCCTG
CTCATGCCGA CGCTGCCCAT GAAGGCCACC AAGATCCCCG CCCCCGACGC CCCGCGCGAG
GAGGTCGTCG CCCGGGCGCT GGAGATGATC CCCAACACCT GCCCCTTCGA CGTGAGCGGG
CACCCGGCCA TGAACGTCCC CTGCGGGACC TCGGAGGGGC TTCCGGTGGG GATGATGCTC
GTGGGCAGAA AGTGGGACGA GGAGACCGTG CTGCGGGCCG CCCGCGCCTT CGAGAAGACG
GGCGCCTACA GGGCTTCATA A
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| Protein sequence | MVRVPDPGRL VEIARSSFGL RLGEEEARSF AGLMEASIAS YRRLDQLAEP SLPVKYPRTG
GRRPEPEENP LNAWYYRCSI KGAGEGPLAG KRVAVKDNVA VAGVPMMNGS ATLEGYVPEF
DATIVTRILD AGGEISGKAV CEHLCFSGGS HTSDTGPVLN PHDRTRSAGG SSSGSAALVA
AGEVEMAIGG DQGGSIRIPS CWCGTYGLKP TYGLVPYTGV FPIELTLDHV GPIAASVSDV
ALLLSAIAGE DGLDPRQREV RVGDYQNALE RGVEGVRIGV VAEGFSLPSL SEEDVDETVR
RAADTFRELG AEVQEVSIPL HRDGIHIWNA IAIEGATELM VRGNGMGTNW EGHYSTSLLD
AYWRGRTALA GELSETVKLT MLTGQYMREA YGGRYYARAR NLARRLRAAY DAALERADLL
LMPTLPMKAT KIPAPDAPRE EVVARALEMI PNTCPFDVSG HPAMNVPCGT SEGLPVGMML
VGRKWDEETV LRAARAFEKT GAYRAS
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