Gene Rxyl_1694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRxyl_1694 
Symbol 
ID4116652 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRubrobacter xylanophilus DSM 9941 
KingdomBacteria 
Replicon accessionNC_008148 
Strand
Start bp1717070 
End bp1717699 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content60% 
IMG OID638036492 
Productisochorismatase hydrolase 
Protein accessionYP_644466 
Protein GI108804529 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGATGC ATATAGAGGG ATTCGGCGGA CGGGGCGGCT TTGGCCGCCG CCCCGCGCTT 
GTAGTAGTGG ACATGACACT TGGCTTTACC GCACAGGACT CACCCTTGGC CTGTGACCTG
GAAGGGCAGG TAGCCAACAT CCAGCGCCTC TTGCGGAGTG CTAGGGAGGT TGGGATACCC
GTCGTTTTCA CGACGGTTGC CTACAAAGAG AGCGACAAAC TCACGGCTGC GGCTTTTATC
GACAAGGTGC CGGCGCTTCT TACGCTGGAG GCTGGCAGCC GCTGGGCGGA TGTCGACCCT
CGTATATCTC CTCTCGCTTC AGAGCCGGTG CTCAACAAGC TTTTTGCCTC TGCTTTCTTC
GGCACCCCTC TAAGCTCGTT GCTTACCGCT GCCGGTGTTG ATACGCTCAT CGTTTGCGGT
GCCTCGACCA GCGGTTGTGT GCGGGCTACG GTGGTGGATG CCCTTCAGCA CGGATTTCGC
CCCATCGTGC CGCATGATGC CGTGGGCGAC CGCAATCAGC GCGCTCATGA GGCTAACCTC
TACGATATCG ACGCAAAGTA CGGGGATGTA GTTCCGACGA AAGACGTGCT GAAATACCTG
GAGGAGGTCG GTGCCGCACA CGCTCGCTGA
 
Protein sequence
MRMHIEGFGG RGGFGRRPAL VVVDMTLGFT AQDSPLACDL EGQVANIQRL LRSAREVGIP 
VVFTTVAYKE SDKLTAAAFI DKVPALLTLE AGSRWADVDP RISPLASEPV LNKLFASAFF
GTPLSSLLTA AGVDTLIVCG ASTSGCVRAT VVDALQHGFR PIVPHDAVGD RNQRAHEANL
YDIDAKYGDV VPTKDVLKYL EEVGAAHAR