| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1690 |
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| Symbol | |
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| ID | 4116648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1713663 |
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| End bp | 1714796 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638036488 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_644462 |
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| Protein GI | 108804525 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.074722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGGCG GGCGCGCCGC GGATCCCGCG CTGGCCGCGC GGGTTCTGGA GCACATCTCG
GACGTCTTCC TGATCCTGGA CGAGCGGGGC AGGGTCGCTT ACCTGAACCC GGCGGGGGAG
GAGGCCCTCG GGGTCTCGCG CGAGGCGGTG GGGAGAAGGC TCGAGGAGAT CCTGCCGGAG
GCGGCCTCCG GCAGGGTCGC CGAGGCCCTG GAGCGTGCGG CACGGGAGCG GGGCTCGGTC
TCCTTCGAGC TGAACTCCAG GACCCTCGGC GGCTGGTTCG CCGGGCGGGT CTACCCCTTT
CCGGGCGGCC TCGCCCTGCT GCTGTGGGAC ATCTCGGAGC GCAAGGAGGA GCAGGAGCGC
TACCAGCGCC TCTACCGGGA GAAGCACCGG ATAGCGCGGG TTCTGCAGGA GGCGCTGCTC
CCGCCCCGGC TGCCGGAGGT GCCGGGGATA GAGGTGGGGG GGCGTTATCT GGCCGCGGCG
GAGGGGATGG AGGTCGGGGG GGACTTCTAC GACGTGTTCG CCGTAGAGAA CGACGGCTGG
GCGCTCGCGA TAGGGGACGT CACGGGCAAG GGGCCGGAGG CGGCCTCGCT GACCTCCCTC
GCCCGCTACA CCATCCGGAC GGCGGCGATG CGCGTGAAGC GGCCGCGGGG CGTGCTCTCC
TTTCTGAACC GCGAGATCCT GCGCCAGACC GAGGGCGACC GCTTTTTCAC CGTGGTCTAC
TGCGAGCTGG AGCCCTACCG GGCGGGCGAG GGGGCGGTCG AGATCCGGGT GGGCTGTGCG
GGGCACCCCC CTCCGATGGT GTTGCGCAGG GGCGGCGAGG TGGAGACGCT CCCCTCGACC
GGGATGATCC TCGGCGCCGT GGAGGAGCCG GAGGTGGCGA CCTGGTCCGG GCGCCTCTCG
GAGGGAGAGG CGATGGTCCT GTACACCGAC GGGGTGACGG AGGCGCGCGG CCCGGGGGGC
GAGCTCTTCG GGGAGGAGCG GCTGAGGGAG CTGGTGGGCG GGTGCGCCGG GGCGGCCGCC
GAGGAGGTCG CCCGCCGGAT AGAGCAAGCG GTGCTGGACT TCCAGCGGGG AGAGGTGCGC
GACGACGTGG CCGTCCTCGT GGCCCGCGTC CAGGACGCGA GCGGGGAGGT GTAA
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| Protein sequence | MAGGRAADPA LAARVLEHIS DVFLILDERG RVAYLNPAGE EALGVSREAV GRRLEEILPE
AASGRVAEAL ERAARERGSV SFELNSRTLG GWFAGRVYPF PGGLALLLWD ISERKEEQER
YQRLYREKHR IARVLQEALL PPRLPEVPGI EVGGRYLAAA EGMEVGGDFY DVFAVENDGW
ALAIGDVTGK GPEAASLTSL ARYTIRTAAM RVKRPRGVLS FLNREILRQT EGDRFFTVVY
CELEPYRAGE GAVEIRVGCA GHPPPMVLRR GGEVETLPST GMILGAVEEP EVATWSGRLS
EGEAMVLYTD GVTEARGPGG ELFGEERLRE LVGGCAGAAA EEVARRIEQA VLDFQRGEVR
DDVAVLVARV QDASGEV
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