| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1682 |
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| Symbol | |
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| ID | 4116641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1701922 |
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| End bp | 1702890 |
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| Gene Length | 969 bp |
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| Protein Length | 322 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638036481 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_644455 |
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| Protein GI | 108804518 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0152598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAA CCCAACAGAC CCTGCGGGGG AGGCTCTCCG GCCTCGGGTT CTCCAGGGAG
CTGGTGCTCC TCGGCGTCCT CCTCGCCGAG CTGGCGGTCA TGAGCCAGCT CTCGCCGGTC
TTCCTCACCG TGGGGAACCT CCTCAACCTC TCCCGCTTCT TCGTGGAGGT CGGCCTCATC
GCGCTGGGGA TGACCCTGAT CATCATAACC GGCGGCATCG ACCTCTCGGT CGGCTCCAAC
CTGGCGCTGG TCTCGGTGGT GGTGGGCTTC TCCTACGTGT GGGGGCTCCC GCTGGGCGCG
GCGATAGTCC TCGGGATGCT GGTGGGGCTG CTCGCCGGGC TCTTCAACGG GCTCTTCTCC
ACCCTGCTCG GCCTGCACCC GCTGGTGGTC ACCCTGGGGA CCTTCGCCCT GTTCCGGGGG
CTCGCCTACG GGCTCTCCGA CGCCGACGCG GTCTCCAGCT TCCCGGCCTG GTTCGCCTAC
TTCGGGCAGG CCTACCTCGG GCCCGTGCCG GGACAGCTGC TGGTCTTCGT GGCGGCGGTG
GCGGTCGTGT GGCTCGTGCT CTCCCGCACC GCCTTCGGCC GCTACGTGTA CGCCATCGGG
AACAACGAGG AGGCCGCCCG CTTCTCCGGG GTGCCCGTCG AGCGGGTGAA GGTGGCGCTG
TACGCCGCGA CCGGGCTCCT CGTCGCCCTG GCGGCCGTCA TCTACACCTC CCGGGTCTCC
ACCGCCCGCG GGGACTCCGG GCTCGGGCTG GAGCTGGACG TGATCTCGGC GGTCGTCCTG
GGCGGGGCGA GCATCTACGG CGGCACCGGC ACCATAGCCG GGACGGTGCT GGGCGTCCTG
ATCATCGCCA CCCTGCGCAA CGGGCTGCTC CTGGCCGGCG TGCCGAGCAC CTGGCAGCTT
TTCCTGCTCG GTGTGCTGCT GCTGGCCGCC GTGTTCGTCA ACGAGTTCTT CAGAAAGGAG
GAGTCTTGA
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| Protein sequence | MSATQQTLRG RLSGLGFSRE LVLLGVLLAE LAVMSQLSPV FLTVGNLLNL SRFFVEVGLI
ALGMTLIIIT GGIDLSVGSN LALVSVVVGF SYVWGLPLGA AIVLGMLVGL LAGLFNGLFS
TLLGLHPLVV TLGTFALFRG LAYGLSDADA VSSFPAWFAY FGQAYLGPVP GQLLVFVAAV
AVVWLVLSRT AFGRYVYAIG NNEEAARFSG VPVERVKVAL YAATGLLVAL AAVIYTSRVS
TARGDSGLGL ELDVISAVVL GGASIYGGTG TIAGTVLGVL IIATLRNGLL LAGVPSTWQL
FLLGVLLLAA VFVNEFFRKE ES
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