| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1680 |
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| Symbol | |
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| ID | 4117165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1699528 |
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| End bp | 1700745 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638036479 |
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| Product | rhamnose isomerase related |
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| Protein accession | YP_644453 |
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| Protein GI | 108804516 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4952] Predicted sugar isomerase |
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| TIGRFAM ID | [TIGR02635] L-rhamnose isomerase, Streptomyces subtype |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0758424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGGCTA CGGTGCGGCA GGCGTACGAG GCGTTCAGGG AGACGCAGGC GGAGCGCGGG
GTGGACCTGG CGGGCGTGGA GGAGCGCCTG CGCGCGCAGC GGGTGGAGAC GCCCTCTTGG
GGTTACGGGA ACTCCGGCAC GCGCTTTGCG GTCTTTCCGC AGCCCGGCGT CCCGCGCAAC
CCCTTCGAGA AGCTCCAGGA CGCGGCGCAG GTGCACGCCC ACACGGGGAT CTGCCCCTCC
GTGGCGCTCC ACATCCCGTG GGATGCGGTG GAGGACTACC GGGAGCTTGC GGACTACGCC
GGCTCGCTGG GGCTGCGCCT GGGGGCGATC AACCCGAACC TCTTCCAGGA GGAGGACTAC
CGGCTGGGGA GCGTCTGCAA CCCCGACCCC GCCGTGCGGC GCAGGGCCAC CGACCACCTG
CTGGAGTGCG TGGAGATAGC CGGGGAGGTG GGCTCCCGGG TCCTCTCCCT GTGGCTCGCC
GACGGTACAA ACTACCCCGG ACAGGACTCC TTCGTGGAGC GGCGGGGCAG GATGCTGGAG
TGCCTCTCGG AGGTCTACGG CCGGATGCCG GAGGACATGC GGCTGCTGCT CGAGTACAAG
CTCTTCGAGC CGGCCTTCTA CCACACCGAC CTCTGCGACT GGGGCTGCGC CCTCACCATG
TGCCAGAAGC TCGGCGAGCG GGCGCTGGTG CTGGTGGACC TCGGCCACCA CGCCCAGGGG
GTGAACGTCG AGCACATCGT CTCGCTGCTG CTGGACGAGG GGCGTCTGGG GGGCTTCCAC
TTCAACAACC GCAAGTACGC CGACGACGAC CTCGTGGTGG GCTCCATAAA CCCCTTCGAG
CTCTTCCTGA TCTACGTGGA GCTCCTGGAG GCCGAGGAGG ACCCCGGGGT GCGCATCGAG
TACATGATCG ACCAGGCGCA CAACATCGAG CCTAAGATAG AGGCCATGAT CCTCTCGGTG
ATGAACCTGC AGGAGGCCTA CGCGAAGGCG CTCCTGGTGG ACCGGGAGGC GCTGCGCGAG
GCGCGCCTCT CGGGGGACGT CCTCGGCGCG CACCGGCTGC TGCTGGAGGC CTACGGCGCG
GACGTGCGCC CCCTGTGCGC GAAGGTCCGG GAGGATCTGG GGGGGCGGGC CGATCCCGTG
GCGGCCTTCC GCAGGAGCGG CTACCTGGAG CGGGTGGCCG AGGAGCGCCG GGAGGGGAGG
CCGGCCGGAT GGGCGTAG
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| Protein sequence | MEATVRQAYE AFRETQAERG VDLAGVEERL RAQRVETPSW GYGNSGTRFA VFPQPGVPRN
PFEKLQDAAQ VHAHTGICPS VALHIPWDAV EDYRELADYA GSLGLRLGAI NPNLFQEEDY
RLGSVCNPDP AVRRRATDHL LECVEIAGEV GSRVLSLWLA DGTNYPGQDS FVERRGRMLE
CLSEVYGRMP EDMRLLLEYK LFEPAFYHTD LCDWGCALTM CQKLGERALV LVDLGHHAQG
VNVEHIVSLL LDEGRLGGFH FNNRKYADDD LVVGSINPFE LFLIYVELLE AEEDPGVRIE
YMIDQAHNIE PKIEAMILSV MNLQEAYAKA LLVDREALRE ARLSGDVLGA HRLLLEAYGA
DVRPLCAKVR EDLGGRADPV AAFRRSGYLE RVAEERREGR PAGWA
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