Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rxyl_1676 |
Symbol | |
ID | 4117161 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rubrobacter xylanophilus DSM 9941 |
Kingdom | Bacteria |
Replicon accession | NC_008148 |
Strand | - |
Start bp | 1694846 |
End bp | 1696183 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638036475 |
Product | citrate synthase |
Protein accession | YP_644449 |
Protein GI | 108804512 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | [TIGR01798] citrate synthase I (hexameric type) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0308594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGACACAGG AGCCGCAGGG CAGGTCGGAT GGTGCTGCCT CCACCGTTCA GAAGGACGGG AGCCTTTCGG TCACGGACAA CCGCACGGGC AGGAGCTACG AGATAGAGAT AAAGGACGGC ACCGTCCGCT CGATGGACTT CCGGCAGATA AAGGTCGACG AGGACGACTT CGGCCTCATG ACCTACGATC CCGGCTACAC CAACACGGCG AGCTGCCGGA GCGCCATCAC CTACATCGAC GGCGAGAGGG GCATTCTGCA GCATCGGGGG ATCCCGATCG AGGAGCTCTG CGAGCACTCC ACCTACCTCG AGGTGGCCTA CCTGCTCATC CACGGCCACC TGCCGACCGA GGAGGAGCTC TCGCAGTGGG TCTATGACAT AACCCACCAC ACCTACGTCC ACGAGAACAT AAAGAGCTTC ATGGACGGCT TCCGGCACGA CGCGCACCCC ATGGGCATCC TGCTCGCCAG CGTCGGGGCG CTCTCCACCT TCTACCCGGA GGCCAGCGAC ATAGACGACG AGGAGCAGCG GAACATGGCG GCGATACGCC TGATCGCCAA GATGCCCACC ATCGCCGCCT TTGCCTACCG GCACTCCCTC GGGCTGCCCT ACGTCTACCC GGACAACGAC CTCTCCTACA CCGGCAACTT CCTCTCCATG CTCTTCAAGA TGGCCGAGCC CAAGTACGAG CCGGACCCGA GGCTCGAGAA GGCGCTCGAC GTCCTCTTCA TCCTGCACGC CGACCACGAG CAGAACGCCT CCACCTCCGC CGTCAGGACG GTGGGCTCCA CCCGGGCCGA CCCCTACACC GCCGTCGCCG CCGGGGTGGC CGCCCTCTAC GGCCCGCTGC ACGGCGGGGC GAACGTCGCG GTGCTCAAGA TGCTCCAGCG CATCGGCAGC GTGAAGAACA TCCCGGACTT CCTGGAGACC GTCAAGCAGG GCAAGGAGCG CCTCATGGGC TTCGGCCACC GCGTCTACAA GAACTACGAC CCGCGCGCCC GGATCATCAA GAGCCACGTG GACGAGGTGC TCGAGGCCAC CGGCAAGGAG AGCCCCTGGC TGGACATAGC CGTGGAGCTG GAGAAGCGGG CGCTCGACGA CGAGTACTTC ACCAGCCGCA AGCTCTACCC CAACGTGGAC TTCTACTCCG GCCTCATCTA CGAGGCGCTC GGCATCCCCA CCGAGGCCTT CACCGTCATG TTCGCCATCC CCAGGACGTC CGGCTGGATC GCCCAGTGGA TGGAGATGCT GCGCGACCCG GAGCTCAAGA TCGCCCGCCC GCGCCAGATC TACACCGGGC CGCGCGACCA GCACTACGTC CCGATGAGCG AGCGCTAG
|
Protein sequence | MTQEPQGRSD GAASTVQKDG SLSVTDNRTG RSYEIEIKDG TVRSMDFRQI KVDEDDFGLM TYDPGYTNTA SCRSAITYID GERGILQHRG IPIEELCEHS TYLEVAYLLI HGHLPTEEEL SQWVYDITHH TYVHENIKSF MDGFRHDAHP MGILLASVGA LSTFYPEASD IDDEEQRNMA AIRLIAKMPT IAAFAYRHSL GLPYVYPDND LSYTGNFLSM LFKMAEPKYE PDPRLEKALD VLFILHADHE QNASTSAVRT VGSTRADPYT AVAAGVAALY GPLHGGANVA VLKMLQRIGS VKNIPDFLET VKQGKERLMG FGHRVYKNYD PRARIIKSHV DEVLEATGKE SPWLDIAVEL EKRALDDEYF TSRKLYPNVD FYSGLIYEAL GIPTEAFTVM FAIPRTSGWI AQWMEMLRDP ELKIARPRQI YTGPRDQHYV PMSER
|
| |