| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1671 |
|---|
| Symbol | uvsE |
|---|
| ID | 4117156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | + |
|---|
| Start bp | 1690783 |
|---|
| End bp | 1691748 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638036470 |
|---|
| Product | putative UV damage endonuclease |
|---|
| Protein accession | YP_644444 |
|---|
| Protein GI | 108804507 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4294] UV damage repair endonuclease |
|---|
| TIGRFAM ID | [TIGR00629] UV damage endonuclease UvdE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00771336 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGGC TGGGATACCC GACCCAGAAC CTGACGCTCG GGGCCTCGAC GAACCGCTCG
CTCCGGCTCG GGAACCTCCC CGACGCCGCA AGGGTGCGCT CCCTGGTCCG GCAGAACCTG
TGGGACCTGT GCAGGATCCT GCGCTGGAAC GCGCGGCGCG GCGTCGGGAT CTTCAGGCTG
GGCCAGAGCG TCATCCCGTT CGCCTCCCAC CCGAACTTCC CCTACGACTG GGAGAAGGAG
CACGCCGCCG AACTGCGGGA GGCCGGTCGC CTCGCCCGCT CGCTGGGCAT AAGGCTCTCC
ATGCACCCGG GCCAGTATGT AAACCCGGGG AGCCCGCGTC CCGAGGTTGT GGAGCGCAGC
CTGGCGGAGC TCCGCTACGT GGCCCGGCTC TTCGGGCTCC TGGGCTGCGA GGACGCCGTG
CTCGTGCTGC ACCTGGGCGG CGCCCACGGC GACCGCCGGA AGAGCGCCCG GCGCTTCGTG
GGGGCGCTCG CGCAGGAGCG CGGGGTGCTG CGCCACCTGG CGCTGGAGAA CGACGAGCGG
GTGTGGAGCG TGCCGGAGGT CGCCCGCGTG GCCGGGGAGC TCGGGGTTCC GGCCATCGCC
GACACCCTCC ACCACGCGCT GAACCCCGGC GGCCTCGCGC TGCGGGAGGC GCTAGACCTC
ACCCTCCCCA CCTGGAGGGG CCGCCGCCCC AAGGTGCACC TCTCCAGCCA GGACCCGGAG
AAGCAGCCGG GGGCGCACGC CCGGCTCATC CGCCGCGAGG ACTGGCTCGG GCTACTCGAG
GCCCTCGACG GGCGAGAGGC CGACGTCATG GTGGAGGCCA AGGGCAAGGA GCTTGCGCTC
GAGCCGCTGC TGCCTCCAGG AGGAGCCCCG GAAAGGAGGG AAGATGCACG CAAACCCGCC
GCCGGAGGAG ATCCGCGCCC TGCTCCGGAG CGCCCGCAAC ATCGCGGTGG TCGGGCTCTC
GGCTGA
|
|---|
| Protein sequence | MIRLGYPTQN LTLGASTNRS LRLGNLPDAA RVRSLVRQNL WDLCRILRWN ARRGVGIFRL
GQSVIPFASH PNFPYDWEKE HAAELREAGR LARSLGIRLS MHPGQYVNPG SPRPEVVERS
LAELRYVARL FGLLGCEDAV LVLHLGGAHG DRRKSARRFV GALAQERGVL RHLALENDER
VWSVPEVARV AGELGVPAIA DTLHHALNPG GLALREALDL TLPTWRGRRP KVHLSSQDPE
KQPGAHARLI RREDWLGLLE ALDGREADVM VEAKGKELAL EPLLPPGGAP ERREDARKPA
AGGDPRPAPE RPQHRGGRAL G
|
|---|
| |