Gene Rxyl_1667 details

Gene Information

• Locus tag: Rxyl_1667
• ID: 4117152
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rubrobacter xylanophilus DSM 9941
• Kingdom: Bacteria
• Replicon accession: NC_008148
• Strand: +
• Start bp: 1688019
• End bp: 1688606
• Gene Length: 588 bp
• Protein Length: 195 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 638036466
• Product: ECF subfamily RNA polymerase sigma-24 factor
• Protein accession: YP_644440
• Protein GI: 108804503
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.0248741
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGGCGAGT CCGCGCGCAG ATACCTGCTT CTGGCCGACG AGGACCTGCT CTCCCTGGTG 
GAGCGGCGGG ACCCGGACGC CTTCGCGGCG CTCTACGACC GGCACAGCCG GGCCGCCTAC 
TCCCTCGCCT ACAGGATGAT GGGCGAGCGC CAGGCGGCGG AGGACCTGGT GCAGGACGCG 
TTCCTGAAGG TGTGGCGCTC CGCCGGCAGC TACCGCGCCG AGCGGGGGAG CGTGAGGACC 
TGGATCCTCT CCATCCTGCA CAACCGGGGC ATAGACCAGC TCCGGGCCCA GGCGAGCCGC 
CTGCGGACCC GGGAGCGGCT CGAGGCCTCC TCGGAGAAGA CCCAGCCGAG CGAGGCCTTC 
TCGGAGACGC TGCGCAGCTC GCAGCGGGAG CAGGTCCGGG AGGCCATGAG CACCCTGCCG 
CCCGAGCAGC TCAAGATCCT GGAGCTGGCA TACTTCTCCG GCTACACCCA CACGGAGATA 
GCCGAGCTGC TGGGGCTGCC GCTCGGCACG GTGAAGGGCA GGATGCGCCT GGGGCTGAAG 
AAGATAAAGG AGTACTTCGA GTCGAGGGAT CTGGCGGTGC CGAAGTGA 

 

Protein sequence

MGESARRYLL LADEDLLSLV ERRDPDAFAA LYDRHSRAAY SLAYRMMGER QAAEDLVQDA 
FLKVWRSAGS YRAERGSVRT WILSILHNRG IDQLRAQASR LRTRERLEAS SEKTQPSEAF 
SETLRSSQRE QVREAMSTLP PEQLKILELA YFSGYTHTEI AELLGLPLGT VKGRMRLGLK 
KIKEYFESRD LAVPK