| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1635 |
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| Symbol | |
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| ID | 4116342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rubrobacter xylanophilus DSM 9941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008148 |
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| Strand | - |
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| Start bp | 1660760 |
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| End bp | 1661962 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638036434 |
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| Product | peptidase M20 |
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| Protein accession | YP_644408 |
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| Protein GI | 108804471 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.419911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAGCTACC ATTTGTTACC GCCGGGGCCG GCAGGGGCTC CGGCGGCGAC GCGTTTGCGG
GAGGAGAGGC TGCAGAAGAC CAAGCCGGAG AACGAGGTTC TCTCTCTGAC CCGGCGGCTC
GTCGGCTACC GGTCCTACAC CCCCGGGGCC ACGCGGTCCG CCATCGAGTT CATCCGGGGC
TGGTTCGAGG CCCGGGGGCT CCAGACCCTC ACCTACGGGG GGGCGGGGCC CGGGGGCGAG
CTCTCCTCGC TCGCCGTGCG CGTCGGGTCC GGCGAGCCCA GGATACTCTT CCACGGGCAC
GTGGACGTGG TCCCCGGCGA GGAGTGGCAG TTCGACCCCT ACGAGGAGGA CGGCGAGCTC
TACGGGCGCG GCGTCTACGA CATGAAGGGG GCGCTCGCGG CCATGATGTA CGCCATGGAG
GATCTCCACC TCCTCGGTTG CGAGGCCACC GTCGAGCTCC TCGTCGTCCC CGACGAGGAG
CGGGAGTACG GGGGGCCGAA GGGCGCCGAG ATCCTGATCC AGCACGGCCA CGTGGGGGAC
TTCCTGATCA CCGGCGAGCC CACCGACTTC CACGTCGGCA CCCAGGCCAA GGGCGTGCTG
CACCTGCGGG TCACCCTGCG GGGCAAGAGC GCCCACGGCT CGAGGCCCTG GCTCGGCAAG
AACGCGGTGC TCATGGCCTA CGAGCACTAC CGGCGGGTGC TGGAGCTGCC CTTCGCCCAC
GAGCGGAGCG AGCTCTTCCC CTACCCGAGC ATAAACTTCG CCCGGATCAT CGGCGGGGAC
GTCATAAACC GGGTGCCGGA CCGTGCCACC TACGACATGG ACATCCGCTA CCTGCCGGGG
CAGGACCCCA AGGAGATCAC CCGCCAGATC CGCTCCATCG ACCTGCCCGC CGAGGTGGAG
GTGCTCTACT CCTGCGAGCC CACCTACGTC TCCCGCAGAA ACCCCTACGT GAAGGCTCTC
AGGGAGGTCG CCGCGCGGCA CTACCACGGC AACCCGGTCG GCGTCGGACG CCACGGCGCC
TCGGACATCG TCTACTTCCA GCGCGTCGGC GTCCCCGGCG TGGAGTTCGG CCCCATCGGG
GGCGGTCACC ACGGCCCCGC CGAGTACGTC GTCTGCGAGT CCCTGGAGGC CTACCGGCAG
ATGCTCGTCC AGTTCGTCCA GATCGTGGGT CGTAACGGCA GGCGCGCGGT TAAGGGAGAT
TAA
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| Protein sequence | MSYHLLPPGP AGAPAATRLR EERLQKTKPE NEVLSLTRRL VGYRSYTPGA TRSAIEFIRG
WFEARGLQTL TYGGAGPGGE LSSLAVRVGS GEPRILFHGH VDVVPGEEWQ FDPYEEDGEL
YGRGVYDMKG ALAAMMYAME DLHLLGCEAT VELLVVPDEE REYGGPKGAE ILIQHGHVGD
FLITGEPTDF HVGTQAKGVL HLRVTLRGKS AHGSRPWLGK NAVLMAYEHY RRVLELPFAH
ERSELFPYPS INFARIIGGD VINRVPDRAT YDMDIRYLPG QDPKEITRQI RSIDLPAEVE
VLYSCEPTYV SRRNPYVKAL REVAARHYHG NPVGVGRHGA SDIVYFQRVG VPGVEFGPIG
GGHHGPAEYV VCESLEAYRQ MLVQFVQIVG RNGRRAVKGD
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