| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rxyl_1630 |
|---|
| Symbol | |
|---|
| ID | 4116337 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rubrobacter xylanophilus DSM 9941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008148 |
|---|
| Strand | - |
|---|
| Start bp | 1656852 |
|---|
| End bp | 1657847 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638036429 |
|---|
| Product | respiratory-chain NADH dehydrogenase, subunit 1 |
|---|
| Protein accession | YP_644403 |
|---|
| Protein GI | 108804466 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1005] NADH:ubiquinone oxidoreductase subunit 1 (chain H) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCTTG AGTACCTCGA GCAGGAGCCC TGGCGGTTTC TGATCTCCTC GGCGACCGTC
ATCTTTCTGG TCCTGAACAT CGCCGCGGTG CTCACGCTCG CCGAGCGCAA GGTCTCCGCC
TACATCCAGC TCAGGTACGG CCCCAACCGG GTGGGGCCGC GCGGGCTGTT GCAGCCCGCC
GCCGACGTGG TCAAGCTGTT CATTAAAGAG AACGTCTCGC CCGGCCGGGC CGACCGCTGG
GTCTTTCTCG CGGCCCCCAT CGCCATGTTC CTGCCGGCCG CCGCGGTGTG GCTCGTCATA
CCGTTCGGGC CCGGGATGGT GGTGGCCGAC CTCAACATCG GGCTCGTGTA CTTCTTCGCC
ATAACCTCCA TCGGGGCCCT CGGGGTCATC ATGGCCGGCT ACGGCAGCCG CTCCAACTTC
TCGCTGCTCG GCGCCCTGAG GGGGGCCGGG CAGATGATCT CCTACGAGGT GCCGCTCATC
CTGAGCCTGC TCGGGGTGGC CATGCTCACC GGGAGCCTCT CGATGGTGGA CATAGTCGAG
TACCAGGCCG GGGGGTTCTG GAACTGGATC ATCTGGCCGC AGCTGCCGAT GTTCCTGGCC
TTCTTCGTCT CGGGGCTCGC CGAGGTCAAG AGGATCCCCT TCGACCTGCC GGAGGGGGAG
AGCGAGATCG TCGGCGGGTT CATGATCGAG TACTCCGGGA TGACCTGGGC GCTCATACAG
GCCTCCGAGT TCGCCTCCAT GGCGGTCATG AGCGCGGTGG CCTCGACCCT CTTTCTGGGG
GGCTGGCAGC CGCCGCTGCC CTTTTTGGAC CTCGGCGTGT TCAACTGGCT GTGGCTCGGG
ATAAAGACCA CGCTGCTCAT CTTCGTCTTC CAGTGGATAC GCTGGACCTT GCCGCGCCTC
AGGATGGACC AGCTCATGGA CCTGGGGTGG AAGATACTGG TTCCGGTGAC CATCCTCTGG
CTGTTCGTGA CGGCCGGGGC CATGCTGGTG ATCTGA
|
|---|
| Protein sequence | MALEYLEQEP WRFLISSATV IFLVLNIAAV LTLAERKVSA YIQLRYGPNR VGPRGLLQPA
ADVVKLFIKE NVSPGRADRW VFLAAPIAMF LPAAAVWLVI PFGPGMVVAD LNIGLVYFFA
ITSIGALGVI MAGYGSRSNF SLLGALRGAG QMISYEVPLI LSLLGVAMLT GSLSMVDIVE
YQAGGFWNWI IWPQLPMFLA FFVSGLAEVK RIPFDLPEGE SEIVGGFMIE YSGMTWALIQ
ASEFASMAVM SAVASTLFLG GWQPPLPFLD LGVFNWLWLG IKTTLLIFVF QWIRWTLPRL
RMDQLMDLGW KILVPVTILW LFVTAGAMLV I
|
|---|
| |